Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq22649 125 5e-24 seq178408 123 2e-23 seq66368 114 8e-21 seq55711 113 3e-20 seq52001 100 2e-16 seq112477 96.9 2e-15 seq184519 91.5 1e-13 >seq22649 Length=5672 Score = 125 bits (138), Expect = 5e-24 Identities = 156/212 (74%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 34768 GACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTC 34827 ||||| ||| | ||||| ||| ||||| ||||||||||| || || | || |||| || Sbjct 769 GACCAAGTGCACGGTGCACTCTTTCTGGATGTTATAGTCTGAGAGAGTACGGCCATCCTC 710 Query 34828 CAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTT 34887 ||| || || || | | ||||| | |||||||| | || | ||||||||| | | Sbjct 709 CAGCTGTTTGCCCACAGAAATCAGATGCTGCTGGTCAGGTGGGAGGCCCTCCTTGGCTTG 650 Query 34888 TATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 ||||| |||||| || || || | ||| ||| ||| || |||| || |||||| Sbjct 649 GATTTTAGCTTTGAC--ATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATGGTC 592 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| |||||||| |||||||||||||| Sbjct 591 TTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 560 >seq178408 Length=1377 Score = 123 bits (136), Expect = 2e-23 Identities = 155/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828 |||| ||| | |||| | | ||||| |||||| ||||||| || |||| |||| ||| Sbjct 1144 ACCAAGTGCAGGGTGGACGCTTTCTGGATGTTACAGTCCGAGAGAGTGCGGCCATCCTCC 1085 Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888 || || || || || || ||||| || |||||||| | || || ||||||||||| | Sbjct 1084 AGCTGTTTGCCCGCCAAAATCAGACGCTGCTGGTCAGGAGGGACGCCCTCCTTGTCTTGC 1025 Query 34889 ATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCT 34946 ||||| |||||| || || | | ||| ||| |||||| || | || |||||| Sbjct 1024 ATTTTAGCTTTGAC--ATTCTCAGTAGTGTCACTGGGCTCGACCTCGAGTGTGGTGGTCT 967 Query 34947 TTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | | ||||||||||||||| ||||||| Sbjct 966 TTTCTATCAGGGTCTTTACAAAGGTCTGCAT 936 >seq66368 Length=2842 Score = 114 bits (126), Expect = 8e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||||||||| | |||||||||||| | ||| ||| ||||| ||||| ||||| || Sbjct 491 CCTCCCCTCAAGCACAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAA 550 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870 ||| | | || ||||| ||||| | || |||||||| | ||||| || |||| Sbjct 551 AGGATACTTCTGTCTTCCAGCTGCTTGCTGGTGAAGATCAACCTCTGCTGATCAGGCGGG 610 Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928 | |||| ||||| | || || ||||| || || || | ||| ||| ||| | Sbjct 611 ATGCCCTTTTTGTCTTGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCCA 668 Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | || | |||||||||||| ||| | | |||||| | ||||||||||| Sbjct 669 CCTCCAGGGTTATGGTCTTACCCTTCAAGGTCTTCATGAAGATCTGCAT 717 >seq55711 Length=2414 Score = 113 bits (124), Expect = 3e-20 Identities = 156/215 (73%), Gaps = 5/215 (2%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| ||| ||||| |||||||| || || || | | |||| Sbjct 2081 AGTACCAAATGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTATGGCCATCC 2140 Query 34826 TCCAGTTGCTTTCCGGCGAAGA-TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| || || || || || | |||| || |||||||| | || | ||||||||||| Sbjct 2141 TCCAGCTGTTTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTC 2200 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | ||||| |||||| || || || | ||| ||| ||| || |||| || || Sbjct 2201 TTGGATTTTAGCTTTGAC--ATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATA 2258 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| ||||| |||||||| |||||||||||||| Sbjct 2259 GTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2293 >seq52001 Length=6774 Score = 100 bits (110), Expect = 2e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810 ||||| ||||| | |||||||||||| | ||| ||||||||| ||||| ||||| || Sbjct 6658 CCTCCTCTCAAGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 6717 Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 ||| |||| | || ||||| ||||| ||||||||||||| | |||||||| Sbjct 6718 AGGGTGCGTCCGTCTTCCAGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTC 6770 >seq112477 Length=10403 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/189 (72%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 34790 TTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATC 34849 ||||| ||||||||||| || || || |||| ||||| || || | || || || Sbjct 1553 TTCTGGATGTTATAGTCTGAGAGAGCACGGCCATCCTCCAGCTGTTTGTCCGCAAAACTC 1612 Query 34850 AGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT 34909 | || |||||||| || || ||||||||||| | ||||| |||||| || || Sbjct 1613 ACACGCTGCTGGTCAGCGGGGACACCCTCCTTGTCTTGGATTTTAGCTTTGAC--ATTCT 1670 Query 34910 --ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967 || | ||| ||| ||| || |||| || | |||||| ||| |||||||||| |||| Sbjct 1671 CAATAGTGTCACTGGGCTCAACCTCAAGTGTGACGGTCTTGCCCATGAGGGTCTTCACAA 1730 Query 34968 AGATCTGCA 34976 || |||||| Sbjct 1731 AGGTCTGCA 1739 >seq184519 Length=2203 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| || |||||| |||||||| ||||| || ||| | || |||| |||||| Sbjct 1415 AGGTGAAGAGTAGCCTCCTTTTGAATGTTGTAGTCAGACAGGGTACGTCCATCCTCCAGT 1474 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || || |||||||||| |||||| || | || | || ||||| || | || Sbjct 1475 TGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTTTCTTGGATC 1534 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGC--CTCGACATCAACGGTTATGGTCTTTC 34949 || || || | || | | || || | || || |||| | |||||||| | Sbjct 1535 TTGGCCTTTACATTTTCTGTTGTATC--TGACAGTTCAACCTCAAGAGGGATGGTCTTCC 1592 Query 34950 CCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||||| || ||||| |||||||| Sbjct 1593 CCATAAGGGTTTTCACAAAAATCTGCAT 1620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324927217547768