Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq55711 129 5e-25 seq40632 123 2e-23 seq184519 120 2e-22 seq98110 96.9 3e-15 seq66368 96.9 3e-15 seq164519 95.1 9e-15 seq55580 87.8 1e-12 >seq55711 Length=2414 Score = 129 bits (142), Expect = 5e-25 Identities = 166/228 (73%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||| | ||| || |||||||| || ||||| ||||| || ||||||||||| | Sbjct 2066 CCACCCCGTAGACGAAGTACCAAATGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAG 2125 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGC-ATATATCAATCTTTGCTGATCCGGCGG 29678 | || | ||| || || |||||||| || | | |||| | ||||| || || || Sbjct 2126 AGAGTATGGCCATCCTCCAGCTGTTTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGTGG 2185 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| ||||| |||||||| | ||| ||||||| | || | ||||||| | || || Sbjct 2186 AATGCCCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAAC 2245 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || ||||| ||||| || | ||| || ||||| |||||||| Sbjct 2246 CTCAAGTGTGATAGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2293 >seq40632 Length=8250 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| | || || ||||||||||| || || | | || | ||| Sbjct 8026 CAACACAAGATGAAGAATAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCTATC 7967 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||||||||||||| | |||| |||||||||||| || ||||| || || || || Sbjct 7966 TTCCAGTTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTTTC 7907 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 ||| | || || ||| |||||| | || |||||||| | |||||||| ||||| Sbjct 7906 TTGGATCTTGGCCTTTACATTTTCTATTGCATCTGAAAGTTCAGCCTCAAGAGTGATAGT 7847 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | | | |||||||| || ||||||||||| Sbjct 7846 CTTCCTTGCAAGGGTTTTAATGAAAATCTGCATTTT 7811 >seq184519 Length=2203 Score = 120 bits (132), Expect = 2e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| || | || ||||||||||| || || | | ||| || ||| || ||||| Sbjct 1418 TGAAGAGTAGCCTCCTTTTGAATGTTGTAGTCAGACAGGGTACGTCCATCCTCCAGTTGC 1477 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 ||||||||| | |||| |||||||||||| || ||||| || || || ||||| | || Sbjct 1478 TTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTTTCTTGGATCTTG 1537 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 || ||| ||||| || || || ||||| || ||||||| || || || || | Sbjct 1538 GCCTTTACATTTTCTGTTGTATCTGACAGTTCAACCTCAAGAGGGATGGTCTTCCCCATA 1597 Query 29764 AAGGTTTTAACAAATATCTGCATTTT 29789 | |||||| ||||| |||||||| || Sbjct 1598 AGGGTTTTCACAAAAATCTGCATCTT 1623 >seq98110 Length=40326 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||| || ||| || ||||| || || ||||| ||||| || ||||||||||| | Sbjct 16451 CCACCCCGCAGACGAAGTACCAAGTGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAG 16510 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || |||||||| ||| | |||| | ||||| || || ||| Sbjct 16511 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAGAAATCAGACGCTGCTGGTCAGGTGGA 16570 Query 29680 ATACCCTCTTTGTCTTGTAATTT 29702 || ||||| |||||||| | ||| Sbjct 16571 ATGCCCTCCTTGTCTTGGATTTT 16593 >seq66368 Length=2842 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 ||||||||||| | ||| |||| || || ||||| ||||| || ||||| || || | | Sbjct 491 CCTCCCCTCAAGCACAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAA 550 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | | | | || || || || |||| | | ||||| || |||||||| ||||| Sbjct 551 AGGATACTTCTGTCTTCCAGCTGCTTGCTGGTGAAGATCAACCTCTGCTGATCAGGCGGG 610 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || |||| ||||||||| | || |||||| | || | |||||| | || || Sbjct 611 ATGCCCTTTTTGTCTTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACC 670 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || ||||| || || || | ||||| || | || ||||||||| Sbjct 671 TCCAGGGTTATGGTCTTACCCTTCAAGGTCTTCATGAAGATCTGCATT 718 >seq164519 Length=6375 Score = 95.1 bits (104), Expect = 9e-15 Identities = 139/194 (72%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 ||||| || || ||||||||||| || || || | | ||| | ||| || ||||| Sbjct 1288 TGAAGGGTAGACTCTTTTTGAATTTTGTAGTCAGACAGGGTATGTCCATCTTCTAGTTGC 1347 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 ||||||||| | |||| |||||||||||| || ||||| | || || || || | || Sbjct 1348 TTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAAT-TCTTCCTTATCCTGGATCTTG 1406 Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763 || ||| |||||| || || | |||| || |||||||| || || || || || Sbjct 1407 GCCTTTACATTTTCTATTGTATCTAAGGGTTCAACCTCAAGAGTGATGGTCTT-CCTGTA 1465 Query 29764 AAGGTTTTAACAAA 29777 | |||||| ||||| Sbjct 1466 AGGGTTTTCACAAA 1479 >seq55580 Length=18577 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/203 (70%), Gaps = 6/203 (3%) Strand=Plus/Minus Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643 |||||| | | || ||||||||||| || || | ||| | || || |||||| Sbjct 4098 TGAAGCATAGGATCCTTTTGAATGTTGTAGTC----AAGGTACATCCGTCTTCCAGTTGT 4043 Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703 ||||||| | |||| ||||||| ||| || ||||| | || || ||||| ||| || Sbjct 4042 TTGCCAGTGAAGATCAGTCTTTGCCGATGAGGAGGAATTCTTTCCTTTTCTTG-AATCTT 3984 Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 | || ||| ||||||| || || | |||| || || ||||| || | || || || Sbjct 3983 GGCCTTTACATTTTCTACTGTATCCAAGGGTTCAACCTCGAGAGTGATGATCTTCCCTGT 3924 Query 29763 TAAGGTTTTAACAAATATCTGCA 29785 | |||||| ||||| ||||||| Sbjct 3923 AAGGGTTTTCACAAAAATCTGCA 3901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384313693154952