Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq38918 210 2e-48 seq16191 199 3e-45 seq123470 131 1e-24 seq13701 113 3e-19 seq43599 109 4e-18 seq37605 105 5e-17 seq84215 102 6e-16 seq152188 100 2e-15 seq93434 89.7 4e-12 >seq38918 Length=10313 Score = 210 bits (232), Expect = 2e-48 Identities = 769/1181 (65%), Gaps = 36/1181 (3%) Strand=Plus/Plus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | ||| |||||||| || || || | || || |||| ||||| | | | Sbjct 4141 GTCATCACACCCCCAGCTGTCTCCAACCCTAAGGACAGGGGAGCCACATCCAACAAAAGC 4200 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACA--AGAATAGCTGCTTGAATAGCAGCAC 281780 | | |||| |||||| |||| || || | ||| ||||| || | ||||| | Sbjct 4201 AGGTCCTGAACCTTTTCAGA--TTTGTCCCCCATCAAAATGGCTGCCTGTACTGCAGCCC 4258 Query 281781 CATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT 281840 |||| || || || |||||||| || | | | | || |||| ||||| || | | Sbjct 4259 CATAGGCCACTGCCTCATCAGGGTTGATACTCTTGTTGAGTTCACGGCCATTAAAGTAGT 4318 Query 281841 TTGAAAGAAGTTGTCTT-ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCA 281899 || || | ||| ||||| || || || | || || || ||||| ||||| ||| Sbjct 4319 CCTGCAGCAGCT-TCTGCACCTTGGGGATGCGGGTGGAGCCCCCCACTAAAACAATATCA 4377 Query 281900 TGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCA 281959 || | | | ||||||| || |||||| | | | || || || || || ||| | Sbjct 4378 TGGATTTTAGCCTTATCCATCTTGGAATCCCGAAGAGCCTTCTCCACCGGCTCCAGAGTA 4437 Query 281960 GCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA--GA-GTGACATTA 282016 | ||||||||||||| ||| | ||||| || | ||||| |||| || ||| || Sbjct 4438 CCCCTAAACAAGTCTGCACACAACTCTTCAAACCTGGCTCTGGTAATGGATGTG----TA 4493 Query 282017 TAA-TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 282075 || ||||||||||| | | ||||||| ||| | | | ||||| || || || Sbjct 4494 GAAGTCAATTCCTTCATAAAGTGAATCAATTTCCAAGTTGGCCTGAGTGCTGGATGACAG 4553 Query 282076 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT--TTG--CTGATT 282131 | | || || | || || || || | || | | | |||| ||| ||| | Sbjct 4554 GGTCCTCTTGGCCCTCTCGCAGGCGGTACGCAGCCGCCTCACGGCTCGCTTGTTCTGGCT 4613 Query 282132 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGAT 282191 ||| || | || | || |||||||| || || || | | || || | | Sbjct 4614 GATG----TCCTTCTTGTGCTTCCTCTTGAACTCCTCCACGAAGTGGTTCACCAGCCTGT 4669 Query 282192 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 282251 | ||||| || || || |||| | || | || | || || | || | |||| | Sbjct 4670 TGTCAAAGTCCTCGCCGCCCAGGTGGGTGTCCCCAGCTGTGGCCTTCACCTCAAAAATCC 4729 Query 282252 CATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 282311 |||| || | || || | | |||||| || || ||||||| |||||| || || | Sbjct 4730 CATCATCTATAGTCAGGATGGACACATCAAATGTGCCTCCACCCAGATCAAAGATCAGGA 4789 Query 282312 CAT-TCATT-TCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 282369 ||| || || || || | || ||| | | ||| ||||| |||| |||||||| || || Sbjct 4790 CATGTCGTTCTCCCTGACCTGCTTTATCT-AAG-CCATAGGCAATGGCAGCAGCTGTGGG 4847 Query 282370 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 282429 |||||| |||||||| | ||||||||||| ||||| |||||||| || ||||| || Sbjct 4848 TTCATTGATAATTCTTAGCACATTAAGACCCGCAATCACACCTGCATCCTTGGTGGCCTG 4907 Query 282430 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCC 282489 | ||| || || || ||||| || || ||||| || || |||| || || | || Sbjct 4908 GCGTTGAGAGTCATTGAAATAGGCTGGCACAGTGATCACAGCATTGGTGACAGGGTGGCC 4967 Query 282490 AATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 282549 | | |||| || || | ||||| ||| | | | ||| || || |||| || || Sbjct 4968 CAAAAAAGCCTCAGCAGTCTCCTTCATCTTAGTCAGTACCATGGAAGAGATTTCCTCAGG 5027 Query 282550 AGAATATTGCTTGGAT-TCATTTTGATATGATACTTCAAAA--TATGGTTTATTACCAAC 282606 | | | ||||| | || || || || || ||| | | || || || | Sbjct 5028 -GTAGAATGCTTTTTTCTCCCCTTTGTAGGACAC--CAATACCTTGGGCTTGCCTCCTTC 5084 Query 282607 ATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG--TCATTAAAA 282664 |||||| |||| ||| |||||| ||||||||||||||| |||| | |||||||| Sbjct 5085 ATTAATTACTTGAAAAGGCCAAAGTTTCATATCTGATTG--CACTACAGAATCATTAAAT 5142 Query 282665 TCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGA 282724 | ||| ||||| | ||||| |||||||| | ||| || ||||| | || | || Sbjct 5143 TTTCTGCCAATCAGACGTTTGGCATCAAAGACAGTGTTCTGGGGATTCATGGCCACCTGG 5202 Query 282725 TATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTT 282784 | ||||||||||| || || || | || || || || || | || || || || Sbjct 5203 TTCTTGGCTGCATCCCCGATGAGCCGCTCCGTGTCGGTGAAGGCCACGTAGCTGGGGGTG 5262 Query 282785 GTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACC 282825 ||||| || || || || || ||||| || || || || || Sbjct 5263 GTGCGGTTGCCCTGGTCGTTGGCAATGATCTCCACCTTGCC 5303 >seq16191 Length=6692 Score = 199 bits (220), Expect = 3e-45 Identities = 457/685 (67%), Gaps = 6/685 (1%) Strand=Plus/Plus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 |||||||| ||||| || ||||| | || | || | |||| | | |||| || ||| Sbjct 5604 TTATCAAAGTCTTCTCCACCCAAGTGGGTGTCCCCAGCTGTAGATTTGACTTCAAAGAGT 5663 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 |||||||||| | | || | ||| || || ||||| |||| |||||||| || Sbjct 5664 CCATCTTCAATTGTAAGAATTGACACAGCAAAAGTGCCACCTCCCAAGTCAAAAATCAGC 5723 Query 282311 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 282370 ||||| |||| | ||||| || | |||||| |||| || ||||||||||||| Sbjct 5724 ACATTTCTTTCAGCTCCAACCTTTTTGTCTAAACCATAAGCAATAGTAGCAGCAGTTGGT 5783 Query 282371 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 282430 ||||| || ||||| | ||||| ||||||||||| ||| |||||||| || || || Sbjct 5784 TCATTGATGATTCTAAGTACATTGAGACCAGCAATAGATCCAGCATCTTTGGTAGCCTGA 5843 Query 282431 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCA 282490 || || || ||||| || ||||| || || | ||| |||| || || || ||| Sbjct 5844 TACTGAGAGTCATTAAAGTAAGCAGGTACTGTGACAACAGCATTGGTAACAGTCTTCCCA 5903 Query 282491 ATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGA 282550 | ||||| ||| ||| || | || | |||| ||| ||||| | ||||||| Sbjct 5904 AGGTAAGCTTCTGCAATTTCCTTGGTCTTGGTCAAAACCATAGATGACA---CTTCTGGA 5960 Query 282551 GAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTA 282610 || | |||| | ||| ||| ||||| | | || | | || |||| Sbjct 5961 TAAAA--CCTTGTCTCTCCCTTG-TATTCTACTTGGACCTTGGGCCTGCCAACATCATTC 6017 Query 282611 ATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTA 282670 | || | | ||||||| |||||||| |||| |||| |||| ||| | Sbjct 6018 ACCACCATGGAGGGCCAATGCTTCATATCAGATTAAACAACAGAATCATCAAACCTACAT 6077 Query 282671 CCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTG 282730 ||| | | ||| |||||||||| ||| ||||| ||||| | |||| |||||| || Sbjct 6078 CCAGTCAGGTATTTGGCATCAAAAACAGTGTTGGTGGGATTCATTGCAACTTGATTCTTT 6137 Query 282731 GCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGA 282790 | ||||| ||||||| ||| || || |||| | ||||| ||| || || | Sbjct 6138 GTGGCATCACCAATCAATCATTCAGTGTCAATAAAGGTGACATAACTTGGGGTGGTTCAG 6197 Query 282791 TTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTA 282850 || || |||| |||| |||| ||||| ||||| | | || | |||| |||||| Sbjct 6198 TTTCCCTGATTATTCACAATTATTTCCACTTTCCTGTACTGGAAGACACTCACACAAGAG 6257 Query 282851 AAAGTTGTTCCTAAATCAATACCAA 282875 | || || || | |||||| |||| Sbjct 6258 TAGGTGGTGCCAAGATCAATGCCAA 6282 >seq123470 Length=29459 Score = 131 bits (144), Expect = 1e-24 Identities = 368/555 (66%), Gaps = 10/555 (2%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | ||| | |||| || ||||| |||||||||||| || ||||| | ||| Sbjct 28846 TTTTTGTCTAAGCCACAAGCAATAGGAGCAGTAGTTGGTTCATTGATGATTCTAAGTACA 28905 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || |||||||||||| |||| |||||||| | || || | || || ||||| || Sbjct 28906 TTGAGACCAGCAATTGTTCCAGCATCTTTGATAGCCTGATGCTCAGAGTCATTAAAGTAA 28965 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511 | ||| || || || || | || || || || |||| ||||| ||| ||| Sbjct 28966 GTAGGTACTGTGATGACAGTATTGGTAACAGTCTTCCCAAGGTAAGCTTCTGCAATTTCC 29025 Query 282512 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG---AGAATATTGCTTGGAT-TC 282567 || || | | |||| || ||||| | || |||||| |||| | | ||| | || Sbjct 29026 TT-ATCTCTGTCAAAACCACAGATGACACTTCTTCTGGAATAGAA-ACTTTTTGTCTCTC 29083 Query 282568 ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCA 282627 || || | ||||| | | | | | || |||| | || | || |||| Sbjct 29084 CCTTGTAT-TCTTACTTGGACCTTGTGCCTTCCAGCATCATTCACTACCATGAAGAGCCA 29142 Query 282628 ATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT-ACCAATTAATCGTTTTG 282686 | |||||||| || |||||| ||| | |||||| | ||||| | ||||| | Sbjct 29143 AGGCTTCATATCGGACTGAACAACAGCATCA-TCAAATCTATGTCCAATGAGGCGTTTGG 29201 Query 282687 CATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCA 282746 |||||||| | | || || ||||| | |||| |||||| ||| | | ||| ||||||| Sbjct 29202 CATCAAAACCA-TGTTAGTGGGATTCATTGCAACTTGATTTTTTGTGGGATCACCAATCA 29260 Query 282747 GATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCG 282806 ||| || || ||||| | |||||| ||| || || | || || ||||||| | Sbjct 29261 ATCATTCAGTATCAGTAAAAGCAACATAACTTGGGGTGGTTCAGTTTCCCTGATCATGGG 29320 Query 282807 CAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAAT 282866 ||| ||||| |||| | | || | | ||| |||||| | | || || || | || Sbjct 29321 AAATTATTTCCACTTCTCTGTGCTGGAAGATACCCACACAATTGTAGGTGGTGCCAAGAT 29380 Query 282867 CAATACCAATAGCAA 282881 |||| |||| |||| Sbjct 29381 CAATGCCAACTGCAA 29395 >seq13701 Length=8639 Score = 113 bits (124), Expect = 3e-19 Identities = 110/142 (77%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | |||||| |||| |||||||||||||||||| || || ||||| | ||| Sbjct 2263 TTTTTGTCTAAACCATAAGCAATAGCAGCAGCAGTTGGTTCGTTGATGATTCTAAGTACA 2204 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || ||||||||||| |||| |||||||| || || || | || || || ||||| || Sbjct 2203 TTGAGACCAGCAATAGTTCCAGCATCTTTGGTAGCCTGACGCTGAGAGTCATTAAAGTAA 2144 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 ||||| || || | || |||| Sbjct 2143 GCAGGTACTGTGACCACAGCAT 2122 Score = 107 bits (118), Expect = 1e-17 Identities = 359/552 (65%), Gaps = 14/552 (3%) Strand=Plus/Minus Query 281777 GCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAA 281836 |||||||| |||||||| ||||||||||| | | | ||| | | ||| |||||||| Sbjct 2917 GCACCATAAGCAACAGCCTCATCAGGATTGATGCTCTTATTCAACTCTTTTCCATTGAAG 2858 Query 281837 AAATTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAAT 281895 |||| ||||||| ||| | ||| || ||||| | || || || || || || || Sbjct 2857 AAATCCTGTAGAAGTT-TCTGAATCTTGGGGATACGGGTAGAACCACCCACCAAGACGAT 2799 Query 281896 TTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAG 281955 ||||| | ||| || || || || || | |||| | |||| || || || || || Sbjct 2798 ATCATGAATCTGGGACTTGTCAAGCTTGGCATCCCGAAGGGCTTTCTCTACAGGGTCCAG 2739 Query 281956 ACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATT 282015 | | ||| | ||| | | |||||||| ||| || | || | || | || Sbjct 2738 GGTGCCACGAAAAAGGTCGGCATTCAGTTCTTCAAATCGGGCACGGGTGATAGAGGTATA 2679 Query 282016 ATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAG 282075 | || |||||||| | | ||||||| ||||| | | || || ||||| || Sbjct 2678 GAAGTCGATTCCTTCATAGAGTGAATCAATCTCAATACTGGCCTGGGTGCTGGAAGAGAG 2619 Query 282076 TGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA-AG---GCTTTTGCTGATT 282131 | || |||||||||||||| || || | || | || | || ||| | || | | Sbjct 2618 AGTGCGCTTAGCACGTTCACAAGCAGTACGAAGGCGACGGACAGCCCTCTTGTTCTCACT 2559 Query 282132 GATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACG 282189 ||| || | |||| || | ||||| ||| ||| | ||| | || | || Sbjct 2558 GAT----GTCCTTCTTATGCTTGCGTTTGAACTCTGCAATGAA--ATGGTTGACCATTCG 2505 Query 282190 ATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 282249 || ||||||||||| || ||||| | || | || | || | | | |||| || | Sbjct 2504 GTTGTCAAAATCTTCTCCACCCAAGTGGGTGTCCCCAGCTGTGGATTTGACTTCAAAGAT 2445 Query 282250 TCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAG 282309 ||||||||||| | | || | |||||| || ||||| |||| |||||||| || Sbjct 2444 TCCATCTTCAATTGTGAGAATTGACACATCAAAAGTGCCACCTCCCAAGTCAAAAATCAG 2385 Query 282310 TACATTCATTTC 282321 ||||| |||| Sbjct 2384 CACATTTCTTTC 2373 >seq43599 Length=47675 Score = 109 bits (120), Expect = 4e-18 Identities = 330/501 (66%), Gaps = 13/501 (3%) Strand=Plus/Plus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | |||||| ||| || ||||||||||||||||||| || ||||| | ||| Sbjct 28223 TTTTTGTCTAAACCATAAGCAGAAACAGCAGCAGTTGGTTCATTGATGATTCTGAGTACA 28282 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 | |||||||||||| |||| ||||||| || || || || || || | ||| || Sbjct 28283 TCAAGACCAGCAATAGTTCCAACATCTTTGGTAGCCTGATGCTGAGAGTCATCAAAGTAA 28342 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511 ||||| | || || || | || || || || |||| |||||| | ||| Sbjct 28343 GCAGGTTCTGTGATGACAGTATTGGTAACAGTCTTCCCAAGATAAGCTTCCGTAATTTCC 28402 Query 282512 TTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGA-ATATTGCTTGGATTCATT 282570 ||||| || | |||| ||| ||||| | ||||||| | | | | ||| | Sbjct 28403 TTCATCTTGGTCAAAACCATAGATGACA---CTTCTGGATAGAAACTTTTTGTCTCTCCC 28459 Query 282571 TTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTTTAAATGGCCAATA 282630 ||| ||| ||||| | || | | || ||| | || | || ||||||| Sbjct 28460 TTG-TATTCTACTTGGACCGTGGGCCTGCCAGCATTATTCACCACCATGAAGGGCCAATG 28518 Query 282631 TTTCATATCTGATTGAACACTTTGGTCATTA--AAATCT-CTACCAATTAATCGTTTTGC 282687 ||||||| |||| ||| ||||| ||| || | ||| | | | ||| || Sbjct 28519 CTTCATATTGGATTAGACA---ACAGCATTATCAAACCTACATCCATTCAGGCATTTGGC 28575 Query 282688 ATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAG 282747 || ||||| | ||||| || | | |||| |||||| || | ||||| ||||||| Sbjct 28576 AT-AAAAACCATGTTGGTGGGGGTCATTGCAACTTGATTCTTTGTGGCATCACCAATCAA 28634 Query 282748 ATGTTCTGTCTCTGTAAATGAAACA-TATGATGGAGTTGTGCGATTACCTTGATCATTCG 282806 ||| || || ||||| | ||| || ||| || || | || || ||||||||| Sbjct 28635 TCATTCAGTGTCAGTAAAGGTGACATTAACTTGGGGTAGTTTGGTTTCCCTGATCATTCA 28694 Query 282807 CAATAATTTCAACTTTACCAT 282827 |||| |||| ||||| |||| Sbjct 28695 CAATTATTTTCACTTTTCCAT 28715 Score = 89.7 bits (98), Expect = 4e-12 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 281663 GTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 281722 ||||| | |||||||| ||||| | |||||| || ||||||||||||| | || | Sbjct 27534 GTCATGACTCCACCAGCAGTTTCAATGCCAAGAAAATGAGGAGTGACATCCAACAGCAGC 27593 Query 281723 ATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCA 281782 | || ||||| |||||| || |||| | || ||||||| || |||| |||||| Sbjct 27594 AAATCTTGAATATTTTCA-CA-TTTGTCTCCAGAGGATAGCTGTCTGGGTAGCTGCACCA 27651 Query 281783 TATGCAACAGCTTCATCA 281800 || ||||||||||||||| Sbjct 27652 TAAGCAACAGCTTCATCA 27669 >seq37605 Length=8049 Score = 105 bits (116), Expect = 5e-17 Identities = 215/313 (69%), Gaps = 20/313 (6%) Strand=Plus/Minus Query 281260 ATAATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTT--CTTGTTATCTGCTTCT 281317 |||| | || ||||||||| ||| ||||| || ||| || ||| |||||| | || Sbjct 6256 ATAACTCTCCAATTCATTTCTAGTATCAAT-GC-GCTCCTTGAGCTTTTTATCTTCCTCG 6199 Query 281318 TCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCT----TCAGA-GAATCTTC 281372 |||| | || || || ||| |||||| ||||||| ||| |||| || ||| Sbjct 6198 GCAAACTTTTCTGCATCATTAACCATTCTTTCAATTTCTTCTGGTGTCAGGCGATTCT-- 6141 Query 281373 CGCGATTATTAGTAATAGTAATATTCTTGGATTTGTT---TGTTGATTTATCAGCGGCAG 281429 | | ||| ||||| || || || || |||||| ||| ||| || | || | Sbjct 6140 ---GGTCATTTGTAATTGTGATCTTATT---TTTGTTGCCTGTACCTTTGTCTTCAGCTG 6087 Query 281430 TCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTC 281489 |||| |||||| ||||| |||| | ||||| ||||||||||| || |||||||| | Sbjct 6086 TCACTCGAAGAATGCCATTCACATCTATCTCAAAGGTGACTTCAATCTGTGGGACCCCAC 6027 Query 281490 TCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGA 281549 ||||||| || || || || || ||| ||||||||| | ||| ||||| || | Sbjct 6026 GGGGAGCAGGAGGAATTCCAGTCAGATCAAAAGTTCCCAGAAGGTGATTGTCTTTCGTTA 5967 Query 281550 ATTTTCGTTCACC 281562 ||||||||| Sbjct 5966 GGGGTCGTTCACC 5954 >seq84215 Length=12371 Score = 102 bits (112), Expect = 6e-16 Identities = 247/368 (67%), Gaps = 11/368 (3%) Strand=Plus/Plus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || ||||| ||||| || || || | || | || | |||| | || || || | | Sbjct 3237 TTGTCAAAGTCTTCTCCACCTAAGTGGGTGTCCCCAGTTGTAGATTGGACCTGAAAGATT 3296 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 ||||| |||| | | || | |||||| || |||| |||| |||||| || | Sbjct 3297 CCATCATCAATTGTGAGAATTGACACATCAAAAGTGTCACCTCCCAGATCAAAGATCA-- 3354 Query 282311 ACATTCATTTCTTT-GTCTTGG---TTTTTATCAAGACCATAC-GCAAAAGCAGCAGCAG 282365 || ||||||||| | || ||||| || | ||||| |||| ||||||||||| Sbjct 3355 -CA--CATTTCTTTCGGCTCCAACTTTTTTGTCTAAGCCATAAAGCAATAGCAGCAGCAG 3411 Query 282366 TTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGG 282425 |||| ||||| || ||||| | ||||| |||||| || | || | |||||||| || | Sbjct 3412 TTGGCTCATTGATGATTCTAAGGACATTGAGACCAATAA-TATTTCAGCATCTTTGGTAG 3470 Query 282426 CTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTT 282485 | || || | |||||||| || ||||| || || || || |||| || || | Sbjct 3471 CCTGATGCTGAGGGTCGTTAAAGTAAGCAGGTACTGTGATGACAGCATTGGTAACAATCT 3530 Query 282486 TTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 282545 | |||| ||||| || ||| || || || | |||| |||| | || | || || Sbjct 3531 TCCCAAGGTAAGCTTCTGTGATTTCCTTTATCTTGGTCAAAACCATTAACGACACTTCTT 3590 Query 282546 CTGGAGAA 282553 ||||| || Sbjct 3591 CTGGATAA 3598 >seq152188 Length=16367 Score = 100 bits (110), Expect = 2e-15 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 ||||| || || ||||| |||||||| ||||||||||| | ||| | || |||||| | Sbjct 7412 TGTACTCTTATCTTGACTGAGGGAGACTCAGCTAAAACTCTGGCTGTTTCAGGCCTTGGT 7471 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 || |||| ||||| | || || |||||||| |||||||||||| | | |||||| | Sbjct 7472 GTGGTTGGGAGAGACAAATACGGGGTTTTCCCTCTTAGAGGAAAAATACTCAATGTTCGA 7531 Query 400417 GATGCTAGTCCTAAA 400431 || ||| || |||| Sbjct 7532 GAAGCTTCTCATAAA 7546 >seq93434 Length=31037 Score = 89.7 bits (98), Expect = 4e-12 Identities = 145/207 (70%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| | | |||||||||||| ||||||||| || | ||| | | ||| ||||||||| Sbjct 10130 CCATAAGTAGAAGCAGCAGCAGGTGGTTCATTGATGAGTCTTAGTATATTGAGACCAGCA 10189 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 || | || |||||||| || || || | ||| || || || || | ||| || || Sbjct 10190 ATAGTGCCAGCATCTTTGGTAGCCTGAC--GCTGAGTCATTGAAGTAAGTAGGTACGGTG 10247 Query 282464 ATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTT 282523 || || |||| ||| | | || |||| || | || ||| ||||| || | Sbjct 10248 ATGACAGCATTTGTAAGT--CTTCCCAAGGTAGACTACTGTAATTTCCTTCATCTTTGTC 10305 Query 282524 AAAATCATTGATGAAATTTGTTCTGGA 282550 |||||||| ||||| | || ||||||| Sbjct 10306 AAAATCATAGATGATACTTCTTCTGGA 10332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3731161199877072