Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq55711 116 4e-21 seq56584 98.7 1e-15 seq178408 95.1 1e-14 seq66368 86.0 6e-12 seq90618 84.2 2e-11 seq98110 82.4 7e-11 >seq55711 Length=2414 Score = 116 bits (128), Expect = 4e-21 Identities = 155/209 (74%), Gaps = 5/209 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | ||||||||||||||| || || ||||| | || | | | ||||| || Sbjct 2087 AAATGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTATGGCCA-TCCTCCAG 2145 Query 133514 CTGCTTGCCCGCGTAAA-TGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 ||| |||||||| ||| | || ||||||||||| || || ||||| |||||||| || Sbjct 2146 CTGTTTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGGA 2205 Query 133573 TCTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTG 133631 | ||| || |||| | ||||| ||||| ||||||| || || | |||| || ||| Sbjct 2206 T-TTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATAGTCTTG 2264 Query 133632 CCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || || || |||||||| Sbjct 2265 CCCGTCAGGGTCTTCACAAAGATCTGCAT 2293 >seq56584 Length=13630 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | ||||||||||||||| ||||| || | | || | | ||||| ||| Sbjct 8555 AAGTGCAGGGTGGACTCTTTCTGGATATTATATTTAGAGAGTGTAGCCA--TCCTCCAGC 8612 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || |||||| | |||| || ||||||||||| || | |||||||||| |||| ||| Sbjct 8613 TGTTTGCCCACACAAATCAGGCGCTGCTGGTCAGGTGTGATGCCTTCCATGTCTTGGAT- 8671 Query 133575 TTTTGCT-TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| ||| | |||| ||||| ||||||| | || | |||| ||| ||||| Sbjct 8672 TTTAGCTCTGACATTCTCATTAGTGTCACTGGGCTCATCCTCAAGTGTGATGGTCTTGCC 8731 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 | ||| || || || || | |||||| Sbjct 8732 TGGCAGGGTCTTCACAAAGACCTGCAT 8758 >seq178408 Length=1377 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/208 (72%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||| ||||||| || || | || | ||| | | | ||||| || Sbjct 1141 AAGTGCAGGGTGGACGCTTTCTGGATGTTACAGTCCGAGAGAGTGCGGCCA-TCCTCCAG 1083 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||| |||||||| |||| || ||||||||||| ||||||| ||| |||||||| || Sbjct 1082 CTGTTTGCCCGCCAAAATCAGACGCTGCTGGTCAGGAGGGACGCCCTCCTTGTC-TTGCA 1024 Query 133574 CTTTTGC-TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| || |||| | |||| ||||| ||||||| || |||| ||| ||| || Sbjct 1023 TTTTAGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACCTCGAGTGTGGTGGTCTTTT 964 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | |||| || ||||| || ||||||| Sbjct 963 CTATCAGGGTCTTTACAAAGGTCTGCAT 936 >seq66368 Length=2842 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||||||||| || ||||| ||| | | ||| || |||||||||| Sbjct 521 GTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGATACTTCTGTCTTCCAGCTGCTTGCTG 580 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 | | | || | || |||||| || || |||||||| | ||||| |||||| |||| Sbjct 581 GTGAAGATCAACCTCTGCTGATCAGGCGGGATGCCCTTTTTGTCTTGGATCTTGGCCTTG 640 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | ||| | ||||| |||||||||| || | ||| | ||| || || ||| || Sbjct 641 ACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTTATGGTCTTACCCTTCAAGGTC 700 Query 133644 TTTACGAAAATCTGCAT 133660 || | ||| |||||||| Sbjct 701 TTCATGAAGATCTGCAT 717 >seq90618 Length=8789 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || |||| |||||||| |||||| |||| || || | ||| | |||| ||| Sbjct 4297 AAGTGTAGGGTGGACTTTTTCTGGCTATTATATTCTGAGAGAGTGCAGTCATCCTACAGC 4238 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || ||||| || || | || | ||||||||| || ||||||| | |||||| ||| Sbjct 4237 TGTTTGCCTGCAAAAGTCAGACACTGCTGGTCAGGTTGGATGCCCTTCTTGTCTTGGATT 4178 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 | |||| | |||| ||||| |||||| || || | |||| ||| ||||| Sbjct 4177 GTAGTTTTGACATTCTCAGTAGTGTCACTGGGCTTAACCTCAAGTGTGATGGTCTTGCCC 4118 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || || ||||||||||| Sbjct 4117 ATCAGCGTCTTCACAAAAATCTGCAT 4092 >seq98110 Length=40326 Score = 82.4 bits (90), Expect = 7e-11 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||||||||| || || ||||| | ||| | | | ||||| || Sbjct 16472 AAGTGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTGCGGCCA-TCCTCCAG 16530 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTC 133567 ||| |||||||| |||| || ||||||||||| || || ||||| |||||||| Sbjct 16531 CTGTTTGCCCGCAGAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTC 16584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482255320793280