Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq167062 260 2e-64 >seq167062 Length=11021 Score = 260 bits (288), Expect = 2e-64 Identities = 621/935 (66%), Gaps = 23/935 (2%) Strand=Plus/Plus Query 162059 CCAGGGACTTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCT 162118 |||||| ||||| | |||| ||| || | |||||| | || || | ||| ||| Sbjct 5000 CCAGGGCTTTATGCCTCAGATGCTCATCCAAACACTGAATGGCAAAGAGGTCGATATCCA 5059 Query 162119 CATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCG 162178 || ||||| || || |||| ||| ||| || || ||||| || | || || | Sbjct 5060 TGTCAAACTTATTGGCAAACAAGTGGTGC---TTGCGCAGCATCCAGTTCAAGTCACCTG 5116 Query 162179 ATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCAT 162238 ||| || || |||||||| || ||||| || ||| |||| || || || |||| || | Sbjct 5117 CTCCAAAAACACACACGGAGCGTACGTGGACACCGGTGCAAGGTGGGTAGGGGGCGCCCT 5176 Query 162239 CGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGG 162298 | ||||| || || |||| |||||||| || ||||||| || || |||||||||| Sbjct 5177 TGGAAACATCACCTTCAAAGTACTGCCACTTGACAAACCTAGCAATTGCGTGCATGTCGG 5236 Query 162299 AGGTGTCGTACTTGTACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAG 162358 | |||||||||||| | | | || | || || || | || | ||||| | || Sbjct 5237 ACATGTCGTACTTGTGGCTTAAGGACAGCGAGCCTGGGACTTCAGGGATCCTCTGAATAG 5296 Query 162359 TAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGA 162418 ||||||| || | || ||||| || || || || || | ||||||||| || | || Sbjct 5297 TAGCCCATAGATACTCATCTGGGCTGTATGTGTCTTTTGCCCACTCCATAAATGTCTGGA 5356 Query 162419 CCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTAC 162478 ||| || | ||| | ||| ||| || ||| | || | ||| || || |||| Sbjct 5357 TTTTTTCATTCTCTAGCACGTACTGGACATAATTCCTACTAACCACAAAATAGGCACTAC 5416 Query 162479 CAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCA 162538 | ||||| | ||| || | ||||||| || |||||| || ||||| | | Sbjct 5417 CTGAAAAGAGAGGTGTGTCCAGAGGAGGGTGCATTTTGTCAGTCCCTGTGTTTGTCAGCT 5476 Query 162539 TTCCCTCTACGACCACGTGTCT----CTTCCTCCACCTGGCCATCTTACTGGTAGACGGG 162594 |||| | || | ||| | ||| ||||||| | | ||| ||| |||| Sbjct 5477 TTCCATTAACAAT----TGTATAATGCTTTTTCCACCTTTCTTTTTTATTGG---ACGGC 5529 Query 162595 TGT---TCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCT 162651 | || || ||||| |||| ||| || ||| || | | || || || Sbjct 5530 ATTCTCTCAGTTTCTAGGTTGTTTTCTCCCATTAACAACTTGAGTTTCCTGACAATTTCC 5589 Query 162652 AGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACG 162711 || ||||| |||| |||||||| | ||||| ||||| || | || ||||| | | Sbjct 5590 AGGTTGGTTTTAATAGGAAAGTCCATACCGCAAAGATTTATCAAGTACTTCCAGTCTGCA 5649 Query 162712 CTGAGTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCG 162771 || | || ||| ||||| | | |||||| ||||| ||||| || |||||||| || || Sbjct 5650 CTCATTCTGTAGAGATCGCGCATACAGTTGAGATCAGCCTGAACCCGACTCCAGGATGCA 5709 Query 162772 TACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCC 162831 ||||| |||||||||| | | |||| || |||||||| |||||| || | || ||| Sbjct 5710 TACACCACGCTCTCCAGCTCACTGGCCACGAAGACATTACTGAAACAGGATGCAATGCCC 5769 Query 162832 ATCACGGCCAGTGAGAACATCGGGTCCGCT---TTCCTATCTACGTGTACGCAGTATAGA 162888 ||||| || | || | | ||| || || | || || || | ||| || | Sbjct 5770 ATCACCGCA---GCCAAAAAGGACTCCTCTGACTTTTTGTCCACATGAATGCAATAGAAG 5826 Query 162889 TTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACC 162948 |||||||| |||||||||||||| | || || | ||| || || || || || ||| Sbjct 5827 TTCTGAGGCATATAGATGGCCCTCAGGAGCCTGTCAAGCATTTCAATTTTGTGATGAACC 5886 Query 162949 ACGATAGAATACGCTATGGGGAACTCAGCCTCCTC 162983 || || ||||| ||||| || || || ||||| || Sbjct 5887 ACTATGGAATATGCTATTGGAAATTCTGCCTCTTC 5921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577037458291200