Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq184519 109 1e-18 seq57523 109 1e-18 seq55580 107 5e-18 seq164519 104 6e-17 seq187028 93.3 1e-13 >seq184519 Length=2203 Score = 109 bits (120), Expect = 1e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || | || || || ||| || | || || ||| || || Sbjct 1617 CAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCCCTCTTGAGGTTGAACTGTCAGAT 1558 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| ||| |||||| ||||| |||||||| ||||||||| || || ||| Sbjct 1557 ACAACAGAAAATGTAAAGGCCAAGATCCAAGAAAAGGAAGGAATTCCTCCTGATCAGCAA 1498 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| ||||| || || ||||| |||| |||||| | || || | || |||||| | Sbjct 1497 AGACTGATCTTTGCTGGCAAGCAACTGGAGGATGGACGTACCCTGTCTGACTACAACATT 1438 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 206385 || || ||| ||||||||||||||| |||||| Sbjct 1437 CAAAAGGAGGCTACTCTTCACCTTGCGTTGAGA 1405 >seq57523 Length=7438 Score = 109 bits (120), Expect = 1e-18 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||||||||| ||| |||||||| || || | |||||||| ||||| Sbjct 3176 GTAAAGGCCAAGATTCAAGATAAAAAAGGAATTCCTCCTGATCCGCAAAGACTGATCTTT 3235 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| ||||||||||| || || | || |||||| | || | |||||| Sbjct 3236 GCTGGCAAGCAACTGGAAGATGGACATACCCTGTCTGACTACAACATTCAAAGGGAGTCT 3295 Query 206365 ACTCTTCACCTTGTTTTGAGACT 206387 |||||||||||| | |||||||| Sbjct 3296 ACTCTTCACCTTATGTTGAGACT 3318 >seq55580 Length=18577 Score = 107 bits (118), Expect = 5e-18 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||| || ||||| || | |||||| | || || ||| | || Sbjct 3903 CAGATTTTTGTGAAAACCCTTACAGGGAAGATCATCACTCTCGAGGTTGAACCCTTGGAT 3962 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||||| ||| |||||| |||||||||||||| ||| ||||| || | ||| Sbjct 3963 ACAGTAGAAAATGTAAAGGCCAAGATTCAAGAAAAGGAAAGAATTCCTCCTCATCGGCAA 4022 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| |||||| | || || || ||||||| ||| | || || || |||||| | Sbjct 4023 AGACTGATCTTCACTGGCAAACAACTGGAAGACGGATGTACCTT----GACTACAACATT 4078 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTC 206389 || || || ||| ||||||||||| |||||||||| Sbjct 4079 CAAAAGGATCCTATGCTTCACCTTGTGTTGAGACTTC 4115 >seq164519 Length=6375 Score = 104 bits (114), Expect = 6e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || ||||||| | | |||||| | || || ||| | || ||| | ||| Sbjct 1473 AAAACCCTTACAGGAAGACC-ATCACTCTTGAGGTTGAACCCTTAGATACAATAGAAAAT 1415 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 |||||| ||||| || || || |||| |||| || || |||||||| ||||| Sbjct 1414 GTAAAGGCCAAGATCCAGGATAAGGAAG-AATTCCTCCTGATCAGCAAAGACTGATCTTT 1356 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || ||||| | ||||||||| || || | || ||||| | || ||||||||| Sbjct 1355 GCTGGCAAGCAACTAGAAGATGGACATACCCTGTCTGACTACAAAATTCAAAAAGAGTCT 1296 Query 206365 ACTCTTCACCTTGTTTTGAGACTT 206388 || ||||||||||| ||||||||| Sbjct 1295 ACCCTTCACCTTGTGTTGAGACTT 1272 Score = 87.8 bits (96), Expect = 4e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 204754 AAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCT 204813 ||||||||| ||||||||||| ||||||||||| || | || ||||||| || || Sbjct 1272 AAGTCTCAACACAAGGTGAAGGGTAGACTCTTTTTGAATTTTGTAGTCAGACAGGGTATG 1331 Query 204814 TCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 ||||||||| || ||||| || || ||||| || | ||| ||| Sbjct 1332 TCCATCTTCTAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGA 1374 >seq187028 Length=2864 Score = 93.3 bits (102), Expect = 1e-13 Identities = 109/147 (74%), Gaps = 3/147 (2%) Strand=Plus/Minus Query 206246 TAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGAC---TTATCT 206302 ||||| ||||| ||||| || ||||||||| || || ||||| | | |||| Sbjct 1026 TAAAGGCCAAGATCCAAGATAAGGAAGGAATTCGTCCTGATCAGCAAAGCCGGATGATCT 967 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 | || || ||||| |||||||||| | || || | || |||||| | || || |||| Sbjct 966 TTGCAGGCAAGCAACTGGAAGATGGGCGTACCCTGTCTGACTACAACATTCAAAAGGAGT 907 Query 206363 CTACTCTTCACCTTGTTTTGAGACTTC 206389 |||||||||||| ||| |||||||||| Sbjct 906 CTACTCTTCACCCTGTGTTGAGACTTC 880 Score = 86.0 bits (94), Expect = 1e-11 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 204753 GAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCC 204812 |||||||||| ||| |||||||||||||||| || || | || ||||||| || || | Sbjct 880 GAAGTCTCAACACAGGGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAGGGTAC 939 Query 204813 TTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCG 204849 ||||||||||| ||||| || || ||||| | ||| Sbjct 940 GCCCATCTTCCAGTTGCTTGCCTGCAAAGATCATCCG 976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178900316939112