Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq50693 170 3e-36 seq155161 136 6e-26 seq190386 131 2e-24 seq175166 125 1e-22 seq177824 98.7 1e-14 seq121341 93.3 6e-13 >seq50693 Length=6589 Score = 170 bits (188), Expect = 3e-36 Identities = 176/229 (77%), Gaps = 6/229 (3%) Strand=Plus/Plus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||| ||||||||||||||| || || |||| || |||| ||||| Sbjct 408 TACAAGGTGCTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 461 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| |||||| ||| Sbjct 462 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCGGGCGAGGCGTCGCGC 521 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| ||||||||| Sbjct 522 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGTGCGC 581 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||| | ||| ||||| ||||||| |||||| || ||||||||||||| Sbjct 582 CTGCTGCTGCCGGGCGAGCTGGCCAAGCACGCGGTGTCCGAGGGCACCA 630 >seq155161 Length=9434 Score = 136 bits (150), Expect = 6e-26 Identities = 170/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 ||||| || || || ||||||||||||||| || || |||| || |||| || Sbjct 248 ATCTATAAAGTACTGAAGCAGGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCC 195 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| |||||||| || || || | ||||| | || ||||||| |||||| Sbjct 194 ATGAATATCATGAATTCCTTCGTTACTGACATCTTTGAGCGCATCGCGGGCGAGGCGTCG 135 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 |||||||||| | |||||||||| || ||| | | || ||||||||||| |||||| Sbjct 134 CGCCTGGCGCATTACAACAAGCGCTCAACCATCTCCTCCCGGGAGATCCAGACGGCCGTG 75 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 |||||| | ||| || || ||||||| |||||| || ||||||||||||| Sbjct 74 CGCCTGCTGCTGCCGGGGGAGCTGGCCAAGCACGCGGTGTCCGAGGGCACCA 23 >seq190386 Length=4631 Score = 131 bits (144), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 |||||||| || |||||||| |||||| || || |||| || |||| ||||| Sbjct 3288 TACAAGGTACTGAAGCAGGTACACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 3235 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 || |||||||| || ||||||||||| |||| ||||| | | |||||| ||| Sbjct 3234 GGCATTATGAACTCCTTCGTCAACGACATCTTCGAGCGCATTGCCGGCGAGGCTTCCCGC 3175 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093 ||||||| | |||||||||| || ||| | || ||||||||||| || || ||| Sbjct 3174 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCTGTCCGC 3115 Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || | ||| || ||| |||||| || ||||| ||||||||||||| Sbjct 3114 TTGCTGCTGCCGGGTGAATTGGCCAAACATGCCGTGTCCGAGGGCACCA 3066 >seq175166 Length=1121 Score = 125 bits (138), Expect = 1e-22 Identities = 134/176 (76%), Gaps = 6/176 (3%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 ||||||||||||||||||||||| ||| || || |||| || |||| ||||| Sbjct 170 TACAAGGTGCTCAAGCAGGTGCATCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 117 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| ||||||| | ||||||| ||| Sbjct 116 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCGGCGAGGCCTCCCGC 57 Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGT 725089 ||||||| | |||||||||| || ||| | || ||||||||||| ||||| Sbjct 56 CTGGCGCATTACAACAAGCGCTCGACCATCACGTCCCGGGAGATCCAGACGGCCGT 1 >seq177824 Length=1324 Score = 98.7 bits (108), Expect = 1e-14 Identities = 107/141 (76%), Gaps = 6/141 (4%) Strand=Plus/Minus Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973 || |||||||||||||| ||||||||| || || |||| || |||| ||||| Sbjct 139 TATAAGGTGCTCAAGCAAGTGCACCCCGACAC-----GGGCATC-TCGTCCAAGGCCATG 86 Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033 |||||||||||||| ||||||||||| |||| || |||| | ||||||| ||| Sbjct 85 GGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGTATCGCCGGCGAGGCCTCCCGC 26 Query 725034 CTGGCGCGCTCCAACAAGCGC 725054 |||||| | |||||||||| Sbjct 25 TTGGCGCATTACAACAAGCGC 5 >seq121341 Length=12433 Score = 93.3 bits (102), Expect = 6e-13 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 1818123 GGCACGCCCACCTCGTCAATGTCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTA 1818182 |||||||| |||| ||||||| | | |||||||||| ||||||| | ||| || | Sbjct 10758 GGCACGCCAACCTGGTCAATGGAGAGGTTGGGGTCGGGGGTGATGACAGTGCGAGCCGAG 10699 Query 1818183 AAGTTGACGCGCTTGCCCATGCAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCGC 1818242 |||| || ||||||||||| ||| || || | || ||| ||||||||||| |||||| Sbjct 10698 AAGTCCACTCGCTTGCCCATCAGATTCCCTCGCACCCGGCCTTCCTTGCCCTTCAACCGC 10639 Query 1818243 T 1818243 | Sbjct 10638 T 10638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7159208341101264