Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq55711 98.7 9e-16 seq184519 89.7 5e-13 seq66368 86.0 6e-12 >seq55711 Length=2414 Score = 98.7 bits (108), Expect = 9e-16 Identities = 167/237 (70%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| |||| | | |||||||| | || ||| || || ||||| ||||| | Sbjct 2066 CCACCCCGTAGACGAAGTACCAAATGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAG 2125 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA-TCAACCGCTGCTGGTCCGAAGG 35628 | || | | || |||||||| || |||||||| | ||| ||||||||||| | || Sbjct 2126 AGAGTATGGCCATCCTCCAGCTGTTTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGTGG 2185 Query 35629 AACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 || || ||||||||| ||| ||| || || | | | | | ||||| || | || | Sbjct 2186 AATGCCCTCCTTGTCTTGGAT-TTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAA 2244 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTGTGCG 35744 |||| | ||||| || || ||||||| || |||||||| ||||||| ||| |||| Sbjct 2245 CCTCAAGTGTGATAGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCA-TCTCTGCG 2300 >seq184519 Length=2203 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||| || | |||||| | | || | ||| |||||||||||||||||| || | | Sbjct 1394 CCACCCCGACATCTCAACGCAAGGTGAAGAGTAGCCTCCTTTTGAATGTTGTAGTCAGAC 1453 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 1454 AGGGTACGTCCATCCTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 1513 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| || |||||| ||| | | || | || || | ||| ||| Sbjct 1514 ATTCCTTCCTTTTCTTGGATCTTGGCCTTTACATTTTCTGTTGTATCTGACAGTTCAACC 1573 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | | ||| || || ||| | | ||||||||||| |||||||| Sbjct 1574 TCAAGAGGGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCAT 1620 >seq66368 Length=2842 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTC-GTCGTCCAGCTGCTTACCCGCAA 35603 ||| || || |||||||| |||| |||| | || ||| ||||||||||| | | | Sbjct 526 CTCTTTCTGGATGTTGTAGTCGGA-AAGGATACTTCTGTCTTCCAGCTGCTTGCTGGTGA 584 Query 35604 ATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAG 35663 | ||||||| |||||| || | || | || || ||||| |||||| ||| | | Sbjct 585 AGATCAACCTCTGCTGATCAGGCGGGATGCCCTTTTTGTCTTGGATCTTGGCCTTGACAT 644 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | ||||| || | |||||||||| || || || |||||| |||| || |||| Sbjct 645 TCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTTATGGTCTTACCCTTCAAGGTCTTCA 704 Query 35724 CAAATATCTGCATT 35737 || ||||||||| Sbjct 705 TGAAGATCTGCATT 718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449706781709760