Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq36395 102 6e-17 seq32041 100 2e-16 seq189394 95.1 1e-14 seq137129 84.2 2e-11 >seq36395 Length=32485 Score = 102 bits (112), Expect = 6e-17 Identities = 97/124 (78%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194 || || ||||| | ||| ||||| |||||||| || ||||| ||||| || ||||| ||| Sbjct 15418 GTGGCCTTTGCTGCTGTAGAAGGAATTTTCTTCTCTGGATCTTTTGCTGCTATATTCTGG 15359 Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254 ||||||||| ||||| | |||||||| | || ||||| ||||| | || || | ||| Sbjct 15358 TTAAAGAAAAGAGGTCTTATGCCTGGACTCACCTTTTCCAATGAACTCATTAGCAGAGAT 15299 Query 44255 GAAG 44258 |||| Sbjct 15298 GAAG 15295 Score = 95.1 bits (104), Expect = 1e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 44493 AAAACCCGTTTGATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAA 44552 |||| || ||||||||||||||||| ||||| || ||||| |||||||| || ||||| | Sbjct 7003 AAAATCCCTTTGATTTTATGGAAAACATTTCTTTAGAAGGAAAAACAAATTTCTTTGAGA 6944 Query 44553 AACGCGTTGGAGAATATCAGCG 44574 |||| ||| |||||||||||| Sbjct 6943 AACGAGTTTCAGAATATCAGCG 6922 Score = 82.4 bits (90), Expect = 6e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 43698 GGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGG 43757 |||||||| | ||||||||||| || | ||| || ||| ||||||| ||| | ||||| | Sbjct 28180 GGTTTGTCATCTTTCCAATTCAGTACCCTGATATTTGGAAAATGTATAAACAGGCACAAG 28121 Query 43758 CGTCATTTTGGACAGCAGAAGAAGT 43782 | || || |||||||||||||| || Sbjct 28120 CATCCTTCTGGACAGCAGAAGAGGT 28096 >seq32041 Length=12153 Score = 100 bits (110), Expect = 2e-16 Identities = 89/109 (82%), Gaps = 2/109 (2%) Strand=Plus/Minus Query 43913 CAAGAAGTTCA-ATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAA 43971 || |||||||| |||||| ||||| || || || || || || ||||||||||| ||||| Sbjct 11260 CAGGAAGTTCAGATTACC-GAAGCTCGCTGCTTCTACGGCTTCCAAATTGCCATGGAAAA 11202 Query 43972 TATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGAT 44020 || ||||| |||||||||||||| || || || || ||||| |||||| Sbjct 11201 CATACATTCTGAAATGTACAGTCTCCTCATTGACACTTACATTAAAGAT 11153 Score = 93.3 bits (102), Expect = 3e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 44123 GGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182 |||||||| | || || ||||| | |||||||| || |||||||| || || ||||| Sbjct 9268 GGAGAACGTGTCGTGGCTTTTGCTGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCA 9209 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 | ||||| ||| | ||||||||||| |||||||||| | || ||||| ||||| | Sbjct 9208 TCAATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTT 9149 Query 44243 ATAAGTCGTGATGA 44256 || || | ||||| Sbjct 9148 ATTAGCAGAGATGA 9135 >seq189394 Length=3913 Score = 95.1 bits (104), Expect = 1e-14 Identities = 118/162 (73%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 19540 AAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGT 19599 || ||| ||||||||| || || | |||||| | || || ||||| ||||| ||||| Sbjct 1065 AACAGTGGTTTGCACATCATCATCTTTGATGAAATTGATGCCATCTGCAAGCAGAGAGGG 1006 Query 19600 T------CTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTA 19653 ||||| | |||||| ||||||||||| |||||||| | ||||| ||| | Sbjct 1005 AGCATGGCTGGTAGCACTGGAGTTCATGACACTGTCGTCAATCAGTTGCTGTCCAAAATC 946 Query 19654 GACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATG 19695 || || || | |||||||| || || ||||| ||||| ||| Sbjct 945 GATGGAGTAGAGCAACTGAACAACATCTTAGTCATTGGTATG 904 >seq137129 Length=5299 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/192 (70%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 47259 TATTTCTCGGGTTAGACAATGCAGGAAAAACGGCATTACTCCACATGCTCAAATACAATT 47318 ||||||| || || | ||||| |||||||| |||| || | |||||| || | || Sbjct 1772 TATTTCTTGGATTGAATAATGCTGGAAAAACAACATTGCTACTCATGCTGAATGATAACA 1713 Query 47319 GCATGAAAGAGCATAACCCTACATTACATCCGACCTCTGAACAACTAACAATTGC---TG 47375 | | | | ||| ||| ||||||||||| ||| | ||| ||||||| ||||| || Sbjct 1712 GACTTGGACAACATGTCCCAACATTACATCCCACCACAGAAGAACTAACCATTGCTGGTG 1653 Query 47376 GCATAACATTTAGCACATTTGATTTAGGAGGACACATTCAAGCGCGTAGAATGTGGCAAA 47435 ||| || |||| || ||| || | || ||||| ||||||| || ||| || | ||| Sbjct 1652 GCAGGACCTTTA-CAATTTTTATCTGGGTGGACATGTTCAAGCTCGAAGAGTGGAGAAAA 1594 Query 47436 ATTATTTTCATG 47447 | || ||| || Sbjct 1593 ACTACCTTCCTG 1582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396521728996360