Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq110923 143 2e-29 seq179715 123 2e-23 seq166506 109 4e-19 seq76481 84.2 2e-11 seq163223 82.4 6e-11 >seq110923 Length=21527 Score = 143 bits (158), Expect = 2e-29 Identities = 130/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || |||| ||| || |||||||| ||||| || ||||||||||||||||| ||||| Sbjct 6259 AGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGC 6200 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || || || |||||||| | |||||||| || |||||||| || ||||| |||| | Sbjct 6199 ACACCCAGGCCCATGTCTGCTGACCTCTGATACAGCTGACAGGATAGCTCACCGTTTACC 6140 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCATGAG 30105 || || ||||| || | ||| ||||||||||| || ||||| || Sbjct 6139 ACATAGAACTGGCAAAGGGCATGGCACGGAGGTAGGGCCATAAG 6096 >seq179715 Length=1504 Score = 123 bits (136), Expect = 2e-23 Identities = 160/219 (73%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 29950 GACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAG 30009 || |||||| ||| |||| ||||| || |||||||||| || || | || || || Sbjct 229 GATGTGAGCGATCGTGTAGGTGAGCAGGGAGTAGCTGGTGAG--TA----GCACACCCAG 176 Query 30010 CCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAA 30069 |||||||| | |||||||| || ||||| || || ||||| | || |||||| || Sbjct 175 GCCCATGTCTGCTGACCTCTGATACAGCTGGCAGGATAGCTCACTGTTCACCACGTAGAA 116 Query 30070 CTGACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGC 30129 ||| || | ||| ||||||||||| || |||||||| | ||||| || || || || Sbjct 115 CTGGCAAAGGGCATGGCACGGAGGTAGGGCCATGAGAGAAAGATCTTTTGGATTTCAAGC 56 Query 30130 GCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT 30168 ||||| ||| || |||||| || |||||| ||||| Sbjct 55 GCACAGGATAAT--TCCTGTCGTCAGGGTTGGATCTGAT 19 >seq166506 Length=3163 Score = 109 bits (120), Expect = 4e-19 Identities = 118/153 (77%), Gaps = 5/153 (3%) Strand=Plus/Plus Query 110379 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTC-TC 110437 ||||||||| || || || || || || || ||||| |||| || |||||||| | Sbjct 1089 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTT 1148 Query 110438 TCAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGT 110497 ||| ||||| |||||| ||||| ||||||||||| |||||||||||||| ||||||| | Sbjct 1149 TCA-AGGTCGATTCTTCTCGGGAATGGAGAACCAGGTCTTTCTACCCATAATCACCAAAT 1207 Query 110498 TCTGCTTGCCTCTGACTGAAGACGTAGCGGTCA 110530 |||| || ||| ||||||| || | |||| Sbjct 1208 TCTGTTTACCT---TCTGAAGAGGTTGTAGTCA 1237 >seq76481 Length=4075 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 110413 CTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGAGAACCAA 110472 ||||| |||| || |||||||| | | ||||| |||||| || || ||||||||||| Sbjct 2371 CTGAGAACTAAATTAATCCTGTCCTTTAAAGGTCGATTCTTCTCAGGAATGGAGAACCAC 2312 Query 110473 GTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 ||||| |||||||| || |||| ||||| || ||| Sbjct 2311 GTCTTCCTACCCATAATAACCAAATTCTGTTTACCT 2276 >seq163223 Length=4206 Score = 82.4 bits (90), Expect = 6e-11 Identities = 110/152 (72%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 110371 GCCAGGTGATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTATC 110430 ||||| ||||||||| | || || || || || || ||||| |||| | ||| Sbjct 1999 GCCAGAAAATGAGCTCCCTGTAGAGGTTCCTTGAGTTCTCTACTGAGAACTAAAGTAATC 2058 Query 110431 CTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATC 110490 ||||| | | | || |||||| || |||||||||||||| |||||||||| ||| ||| Sbjct 2059 CTGTCCTTTAAAAGTTGATTCTTCTCAGGGATGGAGAACCAGGTCTTTCTACTCATAATC 2118 Query 110491 ACCACGTTCTGCTTGCCTCTGACTGAAGACGT 110522 || ||||| || ||| | ||||||| || Sbjct 2119 GCCCAATTCTGTTTACCT-TCTCTGAAGAGGT 2149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405355315600224