Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq55711 98.7 6e-16 seq98110 84.2 1e-11 >seq55711 Length=2414 Score = 98.7 bits (108), Expect = 6e-16 Identities = 156/220 (71%), Gaps = 3/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | |||||||| || ||| ||| || || |||||||||||||| || || | Sbjct 2075 AGACGAAGTACCAAATGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTATGG 2134 Query 34549 TCGTCTTCAAGTTGTTTACCGGC-AAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTC 34607 | || || || ||||| || || ||| || | |||||| ||||| || || | ||||| Sbjct 2135 CCATCCTCCAGCTGTTTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTC 2194 Query 34608 CTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGG 34666 ||||||| ||| ||| | ||| || | ||| ||||| | ||| || || | | Sbjct 2195 CTTGTCTTGGAT-TTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTG 2253 Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || || || || || | || |||||||| |||||||| Sbjct 2254 TGATAGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 2293 >seq98110 Length=40326 Score = 84.2 bits (92), Expect = 1e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || ||| ||| || || |||||||||||||| || || || Sbjct 16460 AGACGAAGTACCAAGTGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTGCGG 16519 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | || || || ||||| || ||| | || | |||||| ||||| || || | |||||| Sbjct 16520 CCATCCTCCAGCTGTTTGCCCGCAGAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTCC 16579 Query 34609 TTGTCTGTGATCTT 34622 |||||| ||| || Sbjct 16580 TTGTCTTGGATTTT 16593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313989787947176