Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq55711 138 1e-27 seq98110 93.3 4e-14 seq40632 89.7 4e-13 >seq55711 Length=2414 Score = 138 bits (152), Expect = 1e-27 Identities = 170/231 (74%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || || ||||| |||||| |||| || ||||| || || || Sbjct 2293 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACTATCACACTTGAGGTTGAGCCCAGT 2234 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||||| |||||| ||||| |||||||| || ||||| ||||| || || Sbjct 2233 GACACTATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATTCCACCTGACCAG 2174 Query 27108 CAGCGTTTAATATAC-GCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | || |||||||| |||| || | || | || ||||| || Sbjct 2173 CAGCGTCTGATTTTTTGCGGGCAAACAGCTGGAGGATGGCCATACTCTCTCAGATTATAA 2114 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| || || ||||| ||| | |||||||| | ||| | ||||||||||| Sbjct 2113 CATCCAGAAAGAGTCCACCCTGCATTTGGTACTTCGTCTACGGGGTGGCAT 2063 >seq98110 Length=40326 Score = 93.3 bits (102), Expect = 4e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131 ||||| |||||||| || ||||| ||||| || || |||||| | || | || |||||| Sbjct 16593 AAAATCCAAGACAAGGAGGGCATTCCACCTGACCAGCAGCGTCTGATTTCTGCGGGCAAA 16534 Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191 || |||| || | || | || ||||| ||||| || || ||||| ||| | || Sbjct 16533 CAGCTGGAGGATGGCCGCACTCTCTCAGATTATAACATCCAGAAAGAGTCCACCCTGCAC 16474 Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| | ||| ||||||||||||| Sbjct 16473 TTGGTACTTCGTCTGCGGGGTGGCAT 16448 >seq40632 Length=8250 Score = 89.7 bits (98), Expect = 4e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || | ||||| || | | ||| |||| |||||||| | |||| || Sbjct 7814 ATGCAGATTTTCATTAAAACCCTTGCAAGGAAGACTATCACTCTTGAGGCTGAACTTTCA 7873 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || || || ||||| || ||||| || || || ||||| Sbjct 7874 GATGCAATAGAAAATGTAAAGGCCAAGATCCAAGAAAAGGAAGGAATTCCTCCTGATCAG 7933 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || | | || | || ||||||||| ||||||| || | || | || || |||||| Sbjct 7934 CAAAGACTGATTTTTGCTGGCAAACAACTGGAAGATAGATGTACTTTGTCTGACTACAAC 7993 Query 27168 ATTCAAAAGGAGTC 27181 |||||||||||||| Sbjct 7994 ATTCAAAAGGAGTC 8007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433899261326696