Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq167087 149 6e-31 seq110923 132 4e-26 seq179715 127 2e-24 >seq167087 Length=6633 Score = 149 bits (164), Expect = 6e-31 Identities = 366/545 (67%), Gaps = 14/545 (3%) Strand=Plus/Plus Query 6625 GATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTC 6684 ||||||||| ||||| || | ||| | || |||| || | ||| |||| ||||||| Sbjct 3002 GATCATGTAGGTGAGAAGGGAGTAGGTGGCGGTGTTTAAGGACACACCTAGGCCCATGTT 3061 Query 6685 TCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGAC-GTAGAATTGGCAGA 6743 || | || || ||||||||||||||||| |||||| | || ||||| ||| | | Sbjct 3062 GGTTGACCACTGGTATAGCTGGCAGGACAGCTCACCATTCACCACATTAGAACTGGTAAA 3121 Query 6744 GGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCA 6803 ||| |||||| | || || || |||| |||| || || || || |||| | Sbjct 3122 GGGCATGGCACAGAGGTAGGTTTATATGAGGAAGATATTTTGGATTACAAATACACAGAA 3181 Query 6804 CGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCG 6863 ||| ||||||||||| | ||| | || ||||| ||||| | ||||| ||||| Sbjct 3182 TGATTCTTCTGTCATC-GAGTT--GATTTTGAGTGTCAATCACCTTTTGCAGTTGGTCTA 3238 Query 6864 CTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACT 6923 |||| || || ||||| | | | | || | |||||||| |||||||| | Sbjct 3239 CTCCTTGACCTGAATAATTTGAATTTATATATTTGTATTGTGCCCCAAAATGTCTCCAAT 3298 Query 6924 GGAACCCGTAGACCGGGCCCAAGTC---GCCCTCCTCCCGAGATGG-GAACCCCCGCTTG 6979 | || || || | |||| || || |||| ||| | ||| ||| ||| || Sbjct 3299 GAAAGCCATA-AAGTGGCCTAAATCTGTACCCTTCTC---TGCTGGAGAATCCCAAGCTG 3354 Query 6980 TCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGCTCC 7039 ||||| |||| | | || |||| || | |||||| |||| ||| ||| || || | Sbjct 3355 TCCAGGAAGTAT-GGGA-CCGTTGGCTTGCCAGATTCTCACTCCCTTGGAAGACAGTGCT 3412 Query 7040 TTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTAC 7099 || | || |||| ||| | | ||| |||||| |||||| | || ||||| | Sbjct 3413 TTAGCATTTGTGGATCCCTTGATAAACTACAGCAACTCCTCCAAAACATACTTCCCAAAT 3472 Query 7100 ACACGTTTCGTCGTCAGCAGCGGAAATTCGCCCCGAAGGTTGTATCGGGCCTGTGTGCCG 7159 |||| ||| || |||||||| |||||| | | ||| |||| || ||||| ||||| Sbjct 3473 ACACATTTGGTTGTCAGCAGAGGAAATCCATCATTCAGGCTGTAGCGTGCCTGCATGCCG 3532 Query 7160 AACAC 7164 ||||| Sbjct 3533 AACAC 3537 Score = 149 bits (164), Expect = 6e-31 Identities = 366/545 (67%), Gaps = 14/545 (3%) Strand=Plus/Minus Query 34181 GTGTTCGGCACACAGGCCCGATACAACCTTCGGGGCGAATTTCCGCTGCTGACGACGAAA 34240 |||||||||| ||||| || |||| ||| | | |||||| |||||||| || ||| Sbjct 3537 GTGTTCGGCATGCAGGCACGCTACAGCCTGAATGATGGATTTCCTCTGCTGACAACCAAA 3478 Query 34241 CGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAAC 34300 |||| | ||||| || | |||||| |||||| ||| | | ||| |||| || Sbjct 3477 TGTGTATTTGGGAAGTATGTTTTGGAGGAGTTGCTGTAGTTTATCAAGGGATCCACAAAT 3418 Query 34301 ACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTT 34360 | || | || || ||| ||| |||| |||||| | || |||| || | | |||| Sbjct 3417 GCTAAAGCACTGTCTTCCAAGGGAGTGAGAATCTGGCAAGCCAACGG-TCCC-ATACTTC 3360 Query 34361 CTGGACAAGCGGGGGTTC-CCATCTCGGGAGGAGGGC---GACTTGGGCCCGGTCTACGG 34416 ||||||| ||| ||| ||| | ||| |||| || || |||| | || || Sbjct 3359 CTGGACAGCTTGGGATTCTCCAGCA---GAGAAGGGTACAGATTTAGGCCACTT-TATGG 3304 Query 34417 GTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGCGGACTATTCGGGACA 34476 || || |||||||| |||||||| | || | | | | ||||| || || Sbjct 3303 CTTTCATTGGAGACATTTTGGGGCACAATACAAATATATAAATTCAAATTATTCAGGTCA 3244 Query 34477 GGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAG 34536 |||| ||||| ||||| | ||||| ||||| || | ||| | ||||||||||| Sbjct 3243 AGGAGTAGACCAACTGCAAAAGGTGATTGACACTCAAAATC--AACTC-GATGACAGAAG 3187 Query 34537 GATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCA 34596 ||| | |||| || || || || |||| |||| || || || | |||||| Sbjct 3186 AATCATTCTGTGTATTTGTAATCCAAAATATCTTCCTCATATAAACCTACCTCTGTGCCA 3127 Query 34597 CACCCTCTGCCAATTCTAC-GTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGAT 34655 |||| | ||| ||||| || | |||||| ||||||||||||||||| || || | | Sbjct 3126 TGCCCTTTACCAGTTCTAATGTGGTGAATGGTGAGCTGTCCTGCCAGCTATACCAGTGGT 3067 Query 34656 CGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACA 34715 | ||||||| |||| ||| | || |||| || | ||| | || ||||| |||| Sbjct 3066 CAACCAACATGGGCCTAGGTGTGTCCTTAAACACCGCCACCTACTCCCTTCTCACCTACA 3007 Query 34716 TGATC 34720 ||||| Sbjct 3006 TGATC 3002 >seq110923 Length=21527 Score = 132 bits (146), Expect = 4e-26 Identities = 126/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| ||||| ||||| || || |||||||| |||| ||||| ||||| || | || Sbjct 6087 GATCTTCCTCTTATGGCCCTACCTCCGTGCCATGCCCTTTGCCAGTTCTATGTGGTAAAC 6146 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || ||||| ||||| ||||| ||||| | || | ||||||||| | || ||||| ||| Sbjct 6147 GGTGAGCTATCCTGTCAGCTGTATCAGAGGTCAGCAGACATGGGCCTGGGTGTGCCCTTC 6206 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||| | |||||||| ||||||||||| || Sbjct 6207 AACATCGCCAGCTACTCCCTGCTCACCTACATGATCGCACA 6247 Score = 132 bits (146), Expect = 4e-26 Identities = 126/161 (78%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| |||||||| | ||| || || |||||||| ||||| || | ||| Sbjct 6247 TGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGCACACCCAGGCCC 6188 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 |||||| | || | ||||| ||||| ||||| ||||| || || | || ||||| ||| Sbjct 6187 ATGTCTGCTGACCTCTGATACAGCTGACAGGATAGCTCACCGTTTACCACATAGAACTGG 6128 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 || |||| |||||||| || || ||||| ||||| ||||| Sbjct 6127 CAAAGGGCATGGCACGGAGGTAGGGCCATAAGAGGAAGATC 6087 >seq179715 Length=1504 Score = 127 bits (140), Expect = 2e-24 Identities = 152/206 (74%), Gaps = 8/206 (4%) Strand=Plus/Plus Query 34520 AACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATG 34579 |||||||| ||||| | || | ||||||| || || || || ||||| |||| ||| Sbjct 28 AACCCTGACGACAGGA--ATTATCCTGTGCGCTTGAAATCCAAAAGATCTTTCTCTCATG 85 Query 34580 GCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCCTGC 34639 || || || |||||||| |||| ||||| |||||||| | ||| | ||||| |||||| Sbjct 86 GCCCTACCTCCGTGCCATGCCCTTTGCCAGTTCTACGTGGTGAACAGTGAGCTATCCTGC 145 Query 34640 CAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTAC 34699 ||||| ||||| | || | ||||||||| | || |||| ||| | || ||| Sbjct 146 CAGCTGTATCAGAGGTCAGCAGACATGGGCCTGGGTGTGCTACTCA------CCAGCTAC 199 Query 34700 GCTCTGCTCACGTACATGATCGCTCA 34725 | |||||||| |||| ||||||||| Sbjct 200 TCCCTGCTCACCTACACGATCGCTCA 225 Score = 127 bits (140), Expect = 2e-24 Identities = 152/206 (74%), Gaps = 8/206 (4%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 ||||||||| |||| |||||||| | ||| || | ||| |||| || | ||| Sbjct 225 TGAGCGATCGTGTAGGTGAGCAGGGAGTAGCTGG------TGAGTAGCACACCCAGGCCC 172 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 |||||| | || | ||||| ||||||||||| ||||| | ||| | |||||||| ||| Sbjct 171 ATGTCTGCTGACCTCTGATACAGCTGGCAGGATAGCTCACTGTTCACCACGTAGAACTGG 112 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCAC 6799 || |||| |||||||| || || ||||| |||| ||||| || || || || |||||| Sbjct 111 CAAAGGGCATGGCACGGAGGTAGGGCCATGAGAGAAAGATCTTTTGGATTTCAAGCGCAC 52 Query 6800 ATCACGATCCTTCTGTCATCAGGGTT 6825 | | || | ||||| |||||||| Sbjct 51 AGGATAAT--TCCTGTCGTCAGGGTT 28 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447181684179840