Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq166506 185 7e-42 seq91513 159 3e-34 seq163223 107 2e-18 seq110923 100 2e-16 >seq166506 Length=3163 Score = 185 bits (204), Expect = 7e-42 Identities = 321/467 (69%), Gaps = 0/467 (0%) Strand=Plus/Minus Query 2215 AATGAATTTAAACATTTTCAAAAAATGACATCTTCTTCCACTGACTTAAAACAGAATGTT 2274 |||||||| || ||| |||| |||||| | | || | || ||||||||| | Sbjct 1262 AATGAATTCAAGTGTTTCCAAAGAATGACTACAACCTCTTCAGAAGGTAAACAGAATTTG 1203 Query 2275 GTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAAGCAGGCCTTTGAACAAC 2334 || |||||||| |||||||| ||||| || ||||| || | | |||| || || Sbjct 1202 GTGATTATGGGTAGAAAGACCTGGTTCTCCATTCCCGAGAAGAATCGACCTTGAAAGGAC 1143 Query 2335 AGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCACGTGGGGCTCACTTTGTT 2394 || || ||| | |||||||||||| | || || || || |||| || ||||| ||| || Sbjct 1142 AGGATTAATTTAGTTCTCAGTAGAGAACTCAAGGAACCTCCACAAGGAGCTCATTTTCTT 1083 Query 2395 GCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGGACCAGAATTAAAAGACAGGGTG 2454 || || ||| | ||| | || | || |||| | ||||||||||| | | | ||| Sbjct 1082 GCCAAGAGTCTGGATGATGCCTTAAAACTTATTGAGGAACCAGAATTAACAAATAAAGTG 1023 Query 2455 GATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGAGAGCATTACAAGATCTTGC 2514 || | | |||||||| | || | || ||||| || |||| ||| | | | | || Sbjct 1022 GACATGGTTTGGATAGTGGGAAGCAGTTCTGTATACAAGGAAGCCATGAACAAACCAGGC 963 Query 2515 AAACAGATGCTGTTTTTAACAAGGATTCTGCAAAAATTTGAATGTGATACATACTTCCCA 2574 | | | || | | | ||||||| |||| |||||||| |||| |||| || ||| Sbjct 962 CATCTTAGACTATCTGTGCCAAGGATCATGCAGGAATTTGAAAGTGACACATTTTTTCCA 903 Query 2575 GAAATTAATCTTACCAAATACAAACAACTTACTGAATTTCCAGGTGTTCCCTCTGCCGTG 2634 |||||| || | | |||||||| || | | | |||||||||| |||| ||| Sbjct 902 GAAATTGATTTGGAGAGATACAAACTTCTCCCAAACTACCCAGGTGTTCTTTCTGACGTC 843 Query 2635 CAAGAAGAAAATGGAATTAGATACAAATTTGAGATATATGaaaaaaa 2681 ||||| || || | |||| ||||||||||| ||||||||| ||| Sbjct 842 CAAGAGGAGAAAGACATTAAGTACAAATTTGAAGTATATGAAAGAAA 796 >seq91513 Length=29810 Score = 159 bits (176), Expect = 3e-34 Identities = 180/241 (75%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1290 ATTGTAACATGGCAAAAAGTTAAAGCATCAAGCCCAGAAAACATGGCCACTTTTAGTAAT 1349 ||||| |||||||| ||| | | || ||||||||||||||||| || | || | Sbjct 13345 ATTGTGACATGGCAGAAAATGAGGGCTGTAAGCCCAGAAAACATGGTTACCTACAGCGAG 13404 Query 1350 GACCACGGGGTTGTTGTTCAGCCAGCATACAAAGATAAAATGAACATAACTGAGCTTGGA 1409 | || |||||||| || ||||| | || || ||||| |||||||| |||||||| ||| Sbjct 13405 CAGCATGGGGTTGTGGTCCAGCCTTCCTATAAGGATAAGATGAACATCACTGAGCTGGGA 13464 Query 1410 CTACAAAACACAACTATAACCTTCTGGAACACAACATTGGATGATGAAGGGTGCTACAAG 1469 || || || ||||||| ||||||||||| || || ||| | ||||| ||||| |||||| Sbjct 13465 CTCCAGCACTCAACTATTACCTTCTGGAATACCACCTTGAACGATGAGGGGTGTTACAAG 13524 Query 1470 TGTTTATTTAACACTTTTGGATCTGGGAAGATGTCAGGAATAGGGTGTCTAACCCTTTTT 1529 || | || || || ||||| | | |||| | || | ||||| || || ||||| ||| Sbjct 13525 TGCCTCTTCAATACCTTTGGTGCCGCGAAGTTCTCTGCAATAGCCTGCCTCACCCTCTTT 13584 Query 1530 G 1530 | Sbjct 13585 G 13585 >seq163223 Length=4206 Score = 107 bits (118), Expect = 2e-18 Identities = 361/549 (66%), Gaps = 16/549 (3%) Strand=Plus/Minus Query 2142 AAACTGTATTGCAGCTGTCTCTGAAAATATGGGCATTGGAAACAAGGGAAAACTGCCATG 2201 || ||| ||| ||||| || | || |||||||| | || |||||| | |||| || Sbjct 2254 AAGCTGGCTTGTCGCTGTGTCCCAGAACATGGGCATCAGCAAGAAGGGAGACTTGCCCTG 2195 Query 2202 GCCTCCTCTTAAAAATGAATTTAAACATTTTCAAAAAATG--ACATCTTCTTCCACTGAC 2259 | | | || | ||||| || || |||| |||| | || ||| | ||||| | || Sbjct 2194 GTCCCTGCTCAGGAATGAGTTCAAGTATTTCCAAAGAGTGTCACAACCTCTTC-AGAGAA 2136 Query 2260 TTAAAACAGAATGTTGTAATTATGGGAAGAAAGACATGGTTTTCACTTCCCATTAAAAGC 2319 ||||||||| | |||||| | |||||||| ||||| || | |||| | | ||| Sbjct 2135 GGTAAACAGAATTGGGCGATTATGAGTAGAAAGACCTGGTTCTC-CATCCC-TGAGAAGA 2078 Query 2320 AGG--CCTTTGAACAACAGAATAAATCTGGTTCTCAGTAGACACCTTAAAGAGCCACCAC 2377 | | ||| || |||| || | | | |||||||||||| | || || || || | || Sbjct 2077 ATCAACTTTTAAAGGACAGGATTACTTTAGTTCTCAGTAGAGAACTCAAGGAACCTCTAC 2018 Query 2378 GTGGGGCTCACTTTGTTGCAAAAAGTATAGATCACGCTCTGGAAATTATAATAGG--ACC 2435 || ||||| ||| | || ||||| | || || | || ||| | || || | ||| Sbjct 2017 AGGGAGCTCATTTTCTGGCCAAAAGACTGGACAACAC-CTTAAAACT-TACTAAGCAACC 1960 Query 2436 AGAATTAAAAGACAGGGTGGATAAGATTTGGATAATTGGTGGAAGATCTGTCTATGAGGA 2495 | |||||| | | | ||||| | | |||||||| | || || || ||||| ||| |||| Sbjct 1959 AAAATTAACACATAAAGTGGACATGGTTTGGATAGTGGGAGGCAGTTCTGTTTATAAGGA 1900 Query 2496 GAGCATTACAAGATCTTGCAAAC--AGATGCTGTTTTTAACAAGGATTCTGCAAAAATTT 2553 |||| | | | || | | | ||| ||| | |||| ||| |||| ||| | Sbjct 1899 AAGCACAAAGAAGCCAGGCCATCTTACATG--ATTTGTGACAAAGATCATGCAGGAATCT 1842 Query 2554 GAATGTGATA-CATACTTCCCAGAAATTAATCTTACCAAATACAAACAACTTACTGAATT 2612 ||| |||||| | | | | ||||||| || | ||||| ||| || | || Sbjct 1841 GAAAGTGATATCTTTTCTTCTAGAAATTGATTTGGAGAAATATAAAATTCTCCCAAGATA 1782 Query 2613 TCCAGGTGTTCCCTCTGCCGTGCAAGAAGAAAATGGAATTAGATACAAATTTGAGATATA 2672 |||| ||| ||||| | ||| | || || | |||| |||||||| || | || Sbjct 1781 CTTAGGTTTTCTTTCTGCTATCCAACAGGAGAAAGACATTACATACAAATAGGAAGTCTA 1722 Query 2673 TGaaaaaaa 2681 |||||| || Sbjct 1721 TGAAAAGAA 1713 >seq110923 Length=21527 Score = 100 bits (110), Expect = 2e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 118532 TAAGCCCTGTCAGGTGAGCAATCATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAG 118591 |||| || || | ||| || |||||||| || | || ||||||||| | || || | Sbjct 6261 TAAGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGG 6202 Query 118592 GAACACCCAGACCCATGTCTGCTGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTG 118651 | |||||||| |||||||||||||| ||||| |||| || || || ||||| |||||| Sbjct 6201 GCACACCCAGGCCCATGTCTGCTGACCTCTGATACAGCTGACAGGATAGCTCACCGTTTA 6142 Query 118652 CAACATAAAACTG 118664 | ||||| ||||| Sbjct 6141 CCACATAGAACTG 6129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 413502519435808