Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq55711 122 7e-23 seq22649 105 6e-18 seq178408 89.7 4e-13 seq98110 86.0 5e-12 >seq55711 Length=2414 Score = 122 bits (134), Expect = 7e-23 Identities = 155/212 (73%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 |||||||| || ||| |||||| || || |||||||| | || || | | || || Sbjct 2084 ACCAAATGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTATGGCCATCCTCC 2143 Query 39136 AGCTGTTTGCCCGCAAATA-TAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCAT 39194 ||||||||||||||||| | | |||||||||||||| | || | || ||| ||||| Sbjct 2144 AGCTGTTTGCCCGCAAAAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTG 2203 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 |||||| ||||| || | | || || || | ||| || || | |||||| | || Sbjct 2204 GATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATAGTCTT 2263 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 |||||||| || || |||||||| ||||||| Sbjct 2264 GCCCGTCAGGGTCTTCACAAAGATCTGCATCT 2295 >seq22649 Length=5672 Score = 105 bits (116), Expect = 6e-18 Identities = 152/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || | |||| |||||| || || ||||| || | || || || | || || Sbjct 768 ACCAAGTGCACGGTGCACTCTTTCTGGATGTTATAGTCTGAGAGAGTACGGCCATCCTCC 709 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTCCAT 39194 |||||||||||| || | || ||| |||||||||| |||||| | || ||| ||| | Sbjct 708 AGCTGTTTGCCCACAGAAATCAGATGCTGCTGGTCAGGTGGG-AGGCCCTCCTTGGCTTG 650 Query 39195 GATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 |||||| ||||| || | | || || || | ||| || || | ||||| | || Sbjct 649 GATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATGGTCTT 590 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 |||||||| || || |||||||| ||||||| Sbjct 589 GCCCGTCAGGGTCTTCACAAAGATCTGCATCT 558 >seq178408 Length=1377 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCA 39132 |||||||| || || ||| | |||| || || ||| | || | || || || | || Sbjct 1147 AACACCAAGTGCAGGGTGGACGCTTTCTGGATGTTACAGTCCGAGAGAGTGCGGCCATCC 1088 Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCC 39192 || |||||||||||||| || || |||||||||||||| | || |||| ||| ||||| Sbjct 1087 TCCAGCTGTTTGCCCGCCAAAATCAGACGCTGCTGGTCAGGAGGGACGCCCTCCTTGTCT 1028 Query 39193 ATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTT 39252 ||||| ||||| || | || || || | ||| || || | ||| | | Sbjct 1027 TGCATTTTAGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACCTCGAGTGTGGTGGTC 968 Query 39253 TTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 ||| | |||| || || |||||| | ||||||| Sbjct 967 TTTTCTATCAGGGTCTTTACAAAGGTCTGCATCT 934 >seq98110 Length=40326 Score = 86.0 bits (94), Expect = 5e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || ||| |||||| || || |||||||| | || || || | || || Sbjct 16469 ACCAAGTGCAGGGTGGACTCTTTCTGGATGTTATAATCTGAGAGAGTGCGGCCATCCTCC 16528 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||||||||||||| | || |||||||||||||| | || | || ||| ||||| | Sbjct 16529 AGCTGTTTGCCCGCAGAAATCAGACGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCTTGG 16588 Query 39196 ATTTT 39200 ||||| Sbjct 16589 ATTTT 16593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428535898300136