Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq110923 158 1e-33 seq179715 145 6e-30 seq166506 109 4e-19 seq76481 84.2 2e-11 seq163223 82.4 6e-11 >seq110923 Length=21527 Score = 158 bits (174), Expect = 1e-33 Identities = 134/165 (81%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || |||| ||| || |||||||| ||||| || ||||||||||||||||| |||||| Sbjct 6259 AGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGC 6200 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || || |||||||| |||||||||| || ||||| || || ||||| |||| | Sbjct 6199 ACACCCAGGCCCATGTCTGCTGACCTCTGATACAGCTGACAGGATAGCTCACCGTTTACC 6140 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878 || || ||||| || | ||||||||||||||| |||||||| ||| Sbjct 6139 ACATAGAACTGGCAAAGGGCATGGCACGGAGGTAGGGCCATAAGA 6095 >seq179715 Length=1504 Score = 145 bits (160), Expect = 6e-30 Identities = 165/219 (75%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 29722 GACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAG 29781 || |||||| ||| |||| ||||| || |||||||||| || || |||| || || Sbjct 229 GATGTGAGCGATCGTGTAGGTGAGCAGGGAGTAGCTGGTGAG--TA----GCACACCCAG 176 Query 29782 CCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTCACGTAAAA 29841 |||||||| |||||||||| || |||||||| || ||||| | || |||||| || Sbjct 175 GCCCATGTCTGCTGACCTCTGATACAGCTGGCAGGATAGCTCACTGTTCACCACGTAGAA 116 Query 29842 CTGACACATGGCATGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGC 29901 ||| || | ||||||||||||||| |||||||||||| | ||||| || || || || Sbjct 115 CTGGCAAAGGGCATGGCACGGAGGTAGGGCCATGAGAGAAAGATCTTTTGGATTTCAAGC 56 Query 29902 ACACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT 29940 |||| ||| || |||||| || |||||| ||||| Sbjct 55 GCACAGGATAAT--TCCTGTCGTCAGGGTTGGATCTGAT 19 >seq166506 Length=3163 Score = 109 bits (120), Expect = 4e-19 Identities = 118/153 (77%), Gaps = 5/153 (3%) Strand=Plus/Plus Query 114262 ATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTC-TC 114320 ||||||||| || || || || || || || ||||| |||| || | |||||| | Sbjct 1089 ATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTT 1148 Query 114321 TCAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATCACCACGT 114380 ||| ||||| |||||| ||||| ||||||||||| |||||||||||||| ||||||| | Sbjct 1149 TCA-AGGTCGATTCTTCTCGGGAATGGAGAACCAGGTCTTTCTACCCATAATCACCAAAT 1207 Query 114381 TCTGCTTACCTCTGTCGGAAGACGTAGCGGTCA 114413 |||| |||||| || ||||| || | |||| Sbjct 1208 TCTGTTTACCT---TCTGAAGAGGTTGTAGTCA 1237 >seq76481 Length=4075 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 114296 CTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGAGAACCAA 114355 ||||| |||| || | |||||| | | ||||| |||||| || || ||||||||||| Sbjct 2371 CTGAGAACTAAATTAATCCTGTCCTTTAAAGGTCGATTCTTCTCAGGAATGGAGAACCAC 2312 Query 114356 GTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 ||||| |||||||| || |||| ||||| |||||| Sbjct 2311 GTCTTCCTACCCATAATAACCAAATTCTGTTTACCT 2276 >seq163223 Length=4206 Score = 82.4 bits (90), Expect = 6e-11 Identities = 110/152 (72%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 114254 GCCAGGTGATGAGCTCCAGACGGGGGATCTTTAAGCTCCCTGCTGAGGACTACGTTTAGC 114313 ||||| ||||||||| | || || || || || || ||||| |||| | | | Sbjct 1999 GCCAGAAAATGAGCTCCCTGTAGAGGTTCCTTGAGTTCTCTACTGAGAACTAAAGTAATC 2058 Query 114314 CTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGAGAACCAAGTCTTTCTACCCATTATC 114373 ||||| | | | || |||||| || |||||||||||||| |||||||||| ||| ||| Sbjct 2059 CTGTCCTTTAAAAGTTGATTCTTCTCAGGGATGGAGAACCAGGTCTTTCTACTCATAATC 2118 Query 114374 ACCACGTTCTGCTTACCTCTGTCGGAAGACGT 114405 || ||||| |||||| | || ||||| || Sbjct 2119 GCCCAATTCTGTTTACCT-TCTCTGAAGAGGT 2149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405208461612592