Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq107247 123 2e-23 seq36395 111 1e-19 seq88670 104 2e-17 seq65683 100 2e-16 seq32041 98.7 8e-16 seq13282 98.7 8e-16 >seq107247 Length=7366 Score = 123 bits (136), Expect = 2e-23 Identities = 122/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 31769 CTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCT 31828 || || |||||| | ||||| || || | ||||| |||||||||||| || ||||||| Sbjct 299 CTTGTGAAAACCAACATTCAGATAGCTCTTCCTTCTGGGTGCTACGGAAGAGTAGCTCCA 240 Query 31829 AGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGAC 31888 | ||||| ||||| | ||| |||| || || || || || ||||| |||| | |||| Sbjct 239 CGTTCTGGCTTGGCTGCAAAATACTTCATAGATGTAGGAGCTGGTGTCATAGTTGAAGAC 180 Query 31889 TATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG 31926 ||||||||||| |||| |||| ||||||||||||| Sbjct 179 TATAGAGGAAATATTGGTGTTGTACTGTTTAATTTTGG 142 >seq36395 Length=32485 Score = 111 bits (122), Expect = 1e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 4570 CTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTT 4629 |||| ||||||||||| ||||| || ||||| || | ||| ||||| | |||||| || | Sbjct 15295 CTTCATCTCTGCTAATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCT 15354 Query 4630 TAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACG 4689 | | ||| |||||||| ||||| || ||||| ||||| || |||||||| || ||||| | Sbjct 15355 TTAACCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 15414 Query 4690 CTAC 4693 | || Sbjct 15415 CCAC 15418 Score = 89.7 bits (98), Expect = 4e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 4260 TGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCC 4319 || ||||| || ||||| || || |||||||| ||||| |||||||| ||||| |||||| Sbjct 6925 TGATATTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAAAGAAATGTTTTCC 6984 Query 4320 ATAAAATCAAACGGATT 4336 ||||||||||| ||||| Sbjct 6985 ATAAAATCAAAGGGATT 7001 >seq88670 Length=2616 Score = 104 bits (114), Expect = 2e-17 Identities = 195/284 (69%), Gaps = 6/284 (2%) Strand=Plus/Minus Query 31784 ATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTCCTAGATCTGGATTGGCA 31843 ||||| || || | ||||| |||||||||||| || ||||||| | ||||| |||| Sbjct 2614 ATTCAGATAGCTCTTCCTTCTGGGTGCTACGGAGGAGTAGCTCCACGTTCTGGCTTGGTG 2555 Query 31844 GTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTATAGAGGAAACGTT 31903 | | | |||| || | || || ||||| |||||| ||| ||||||||||| || Sbjct 2554 GCAATATACTTCTCAGATATAGGAGCTGGTGTCATAGATGAAGATTATAGAGGAAATATT 2495 Query 31904 GGAATTGTGTTGTTTAATTTTGG---AGAAAAATCATACAGTATAAAAAAGGGCGATAGG 31960 || |||| | ||||||||||| |||||| | | || | |||||||| || | Sbjct 2494 GGCGTTGTACTATTTAATTTTGGCAAAGAAAAGT-TTGAAG--TCAAAAAGGGTGACCGA 2438 Query 31961 GTAGCTCAACTAATTTGCGAAAAAATAGAAATGCCCCAAATAGAAGTAGCTAATTATCTA 32020 | || || || ||||| |||| | | || ||||||||| || | | | || Sbjct 2437 ATTGCCCAGCTCATTTGTGAAAGGGTTTTTAGTCCAGAAATAGAAGAAGTTCAAGTTTTA 2378 Query 32021 GATTGCACGAAAAGAGGCGCTAAAGGCTTTGGATCTACCGGAAA 32064 ||| |||| |||| || | ||| ||||| || |||||||| Sbjct 2377 GATGACACGGAAAGGGGTTCAGGAGGTTTTGGTTCCACCGGAAA 2334 >seq65683 Length=27072 Score = 100 bits (110), Expect = 2e-16 Identities = 120/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 31767 CGCTAGTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAATAGCTC 31826 |||| || ||||||| |||| | || | ||||| |||||| || || || |||||| Sbjct 26336 CGCTCGTGAAAACCGGCATTCGGACAGCTCTTCCTTCTGGGTGCGACAGAAGAGTAGCTC 26277 Query 31827 CTAGATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAG 31886 | | ||||| ||||| | ||| |||| || || || || || ||||| ||||| || Sbjct 26276 CACGTTCTGGCTTGGCCGCAAAATACTTAATAGATGTAGGAGCTGGTGTCCTAGATGAAG 26217 Query 31887 ACTATAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGGAGA 31929 | |||| |||||| |||| |||| ||||||||||||| || Sbjct 26216 ATTATACAGGAAATATTGGTGTTGTACTGTTTAATTTTGGCGA 26174 >seq32041 Length=12153 Score = 98.7 bits (108), Expect = 8e-16 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 4812 TCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCA 4871 |||| ||| |||||||| || || || || ||||||||||||||||| ||||| || ||| Sbjct 11154 TCTTTAATGTAAGTGTCAATGAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGCA 11213 Query 4872 ATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTC 4915 || || || ||||| ||||| | |||||| || | |||||||| Sbjct 11214 ATTTGGAAGCCGTAGAAGCAGCGAGCTTCGGTAATCTGAACTTC 11257 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 || ||||||||||| ||||| || ||||| || | || ||||| | |||| || || Sbjct 9135 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 9194 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| ||||| | ||||| || ||||||||||| || ||||| || || ||||| || Sbjct 9195 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAAGCC 9254 Query 4692 AC 4693 || Sbjct 9255 AC 9256 >seq13282 Length=9104 Score = 98.7 bits (108), Expect = 8e-16 Identities = 123/167 (74%), Gaps = 4/167 (2%) Strand=Plus/Plus Query 31772 GTTAAAACCGATATTCAAATTTCTTTACCTTCAGGGTGCTACGGACGAA-TAGCTCCTAG 31830 || ||||| || ||||| || || | ||||| |||||| | ||| ||| || |||| | Sbjct 172 GTGAAAACTGACATTCAGATAGCTCTTCCTTCTGGGTGCCATGGAAGAAGTAACTCCATG 231 Query 31831 ATCTGGATTGGCAGTTAAACACTTTATCGACGTGGGTGCGGGTGTTATAGATTCAGACTA 31890 ||| | ||| | | |||||||| || || || || || |||| |||||| | | || Sbjct 232 TTCTAGCTTGACTGCAAAACACTTCATAGATGTAGGAGCTGGTGACATAGATGAAAATTA 291 Query 31891 TAGAGGAAACGTTGGAATTGTGTTGTTTAATTTTGG---AGAAAAAT 31934 ||||||||| |||| ||||| |||||||||| || |||||||| Sbjct 292 TAGAGGAAATATTGGTGTTGTGCTGTTTAATTTCGGGAAAGAAAAAT 338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426045765466376