Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq110923 134 1e-26 seq179715 114 1e-20 >seq110923 Length=21527 Score = 134 bits (148), Expect = 1e-26 Identities = 128/164 (78%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 27208 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 27267 || || |||| ||| || |||||||| ||||| || ||||||||||||||||| ||||| Sbjct 6259 AGGCCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGC 6200 Query 27268 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTT 27327 || || || |||||||| | |||||||| || |||||||| || ||||| || | Sbjct 6199 ACACCCAGGCCCATGTCTGCTGACCTCTGATACAGCTGACAGGATAGCTCACCGTTTACC 6140 Query 27328 ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371 || || ||||| || | ||| ||||||||||| || ||||| || Sbjct 6139 ACATAGAACTGGCAAAGGGCATGGCACGGAGGTAGGGCCATAAG 6096 >seq179715 Length=1504 Score = 114 bits (126), Expect = 1e-20 Identities = 158/219 (72%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 27216 GACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAG 27275 || |||||| ||| |||| ||||| || |||||||||| || || | || || || Sbjct 229 GATGTGAGCGATCGTGTAGGTGAGCAGGGAGTAGCTGGTGAG--TA----GCACACCCAG 176 Query 27276 CCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAAAA 27335 |||||||| | |||||||| || ||||| || || ||||| | | ||||| || Sbjct 175 GCCCATGTCTGCTGACCTCTGATACAGCTGGCAGGATAGCTCACTGTTCACCACGTAGAA 116 Query 27336 CTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGC 27395 ||| || | ||| ||||||||||| || |||||||| | ||||| || || || || Sbjct 115 CTGGCAAAGGGCATGGCACGGAGGTAGGGCCATGAGAGAAAGATCTTTTGGATTTCAAGC 56 Query 27396 GCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT 27434 ||||| ||| || |||||| || |||||| ||||| Sbjct 55 GCACAGGATAAT--TCCTGTCGTCAGGGTTGGATCTGAT 19 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 368638626214232