Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq166013 150 2e-31 seq32041 120 4e-22 seq63341 114 2e-20 seq36395 105 9e-18 seq60851 102 1e-16 >seq166013 Length=23081 Score = 150 bits (166), Expect = 2e-31 Identities = 113/133 (85%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 77127 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 77186 ||||||||||| ||||| ||||| |||||||||||||| |||||||| ||||| | |||| Sbjct 8783 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAAATATTGCTGGTATACGGTTCAATAGAT 8724 Query 77187 TCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA 77246 ||||| ||||||| ||| |||||||| |||||||| ||||| || || | | ||||||| Sbjct 8723 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTA 8664 Query 77247 TTTCTGAGACCAT 77259 ||||| | ||||| Sbjct 8663 TTTCTTATACCAT 8651 >seq32041 Length=12153 Score = 120 bits (132), Expect = 4e-22 Identities = 98/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 48165 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTG 48224 |||||||| ||||| | ||| || ||||||||||| || ||||| ||||| ||||| ||| Sbjct 9135 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 9194 Query 48225 AGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGC 48283 ||||| ||||||| || ||||| ||||||||||| || ||||| || || ||||| || Sbjct 9195 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAAGC 9253 >seq63341 Length=12409 Score = 114 bits (126), Expect = 2e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 77364 TATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAA 77423 || |||||||| || || | | || || || ||||| || |||||||| ||||||||| Sbjct 8810 TAGGTTTCATATGGGCCATGTTCTTTGGCCAGATCACAGCTGGCTTCCAAGGCTCCGTAA 8751 Query 77424 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAA 77483 ||||| ||||| || |||| |||||| | || || || ||| ||||| ||||| Sbjct 8750 TAAATGGTTTCAAAGATCTGCTTATTCAATAACTGAGCCTCTGGACTCTCAAAAGGATAT 8691 Query 77484 TGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTC 77543 | |||||||| ||||||||||| || || || ||||| ||||| || | ||| | Sbjct 8690 CTCATCAGAATAAAAGCATCTGCTAAACCTTGTACCCCAATTCCAATGGGGCGATGGCGT 8631 Query 77544 TTATTGGA 77551 ||||| || Sbjct 8630 TTATTTGA 8623 >seq36395 Length=32485 Score = 105 bits (116), Expect = 9e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 48163 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTT 48222 |||||||||| ||||| | ||| || ||||| ||||| || ||||| || || | ||| | Sbjct 15295 CTTCATCTCTGCTAATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCT 15354 Query 48223 TGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATG 48282 | | ||| ||||| || || ||||||||||| ||||| || |||||||| || ||||| | Sbjct 15355 TTAACCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 15414 Query 48283 C 48283 | Sbjct 15415 C 15415 >seq60851 Length=21511 Score = 102 bits (112), Expect = 1e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTG 78458 || || |||| ||| | || ||||| ||||| ||||||||| | |||||||| || ||| Sbjct 9612 GTACCAGCATGAAAGAGAGTGGGAGAGGCATGGGTAAACCATCTCTCAGAAAGAAGGTTG 9671 Query 78459 TATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 |||||||||||||| | || || || || ||||| || || | ||| | ||||| | Sbjct 9672 TATGTTTCAATAGCAGCATCAATATCTTCTTTGTGAATCCCCACAGATACCCTCATCAGC 9731 Query 78519 ATATGCTGAGGTCTTTCAACC 78539 || || || ||||||||| || Sbjct 9732 ATGTGTTGTGGTCTTTCAGCC 9752 Score = 98.7 bits (108), Expect = 1e-15 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062 ||||||||||| |||||||| || ||||| ||||||| || ||||| | || | || Sbjct 2455 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGAGCAAAGAAAAGATCCCTGGCACGCTGC 2514 Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122 ||||| |||||||| ||||| || | ||| |||||||| | || || ||||||| || Sbjct 2515 TCTTCTTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 2574 Query 78123 TCTAGATATATTGCCATAACTCCAGGTCG 78151 || | || || || | | |||||||| Sbjct 2575 TCCAAGTAAATAGCAAATGCCCCAGGTCG 2603 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 77915 ATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCA 77974 ||||||| ||||| || ||||||||||| ||||||| ||||| ||||||||||| || Sbjct 1997 ATATAGCTTCTCAAAGTCCTCTCCCCAAACCTCATCCAGACCAGGACATTCATTTGGACA 2056 Query 77975 CATCAATGACCAGT 77988 |||||| ||||||| Sbjct 2057 CATCAAAGACCAGT 2070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 692994022990080