Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq166013 154 2e-32 seq32041 113 6e-20 seq60851 111 2e-19 seq36395 111 2e-19 seq63341 96.9 5e-15 >seq166013 Length=23081 Score = 154 bits (170), Expect = 2e-32 Identities = 114/133 (86%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 75722 TGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 75781 ||||||||||| ||||| ||||| |||||||||||||| |||||||| ||||| | |||| Sbjct 8783 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAAATATTGCTGGTATACGGTTCAATAGAT 8724 Query 75782 TCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA 75841 ||||| ||||||| ||| ||||||||||||||||| ||||| || || | | ||||||| Sbjct 8723 TCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGAGCAATAAGTAAACTA 8664 Query 75842 TTTCTGAGACCAT 75854 ||||| | ||||| Sbjct 8663 TTTCTTATACCAT 8651 >seq32041 Length=12153 Score = 113 bits (124), Expect = 6e-20 Identities = 98/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| ||||| | ||| || ||||||||||| |||||||| ||||| || || ||| Sbjct 9135 TCATCTCTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 9194 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 ||||| ||||| | || ||||| ||||||||||| || ||||| || || || || || Sbjct 9195 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCAGCAAAAGCC 9254 Query 46774 AC 46775 || Sbjct 9255 AC 9256 >seq60851 Length=21511 Score = 111 bits (122), Expect = 2e-19 Identities = 124/166 (75%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 77339 CTAAATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATT 77398 ||||| | ||| |||||||| || || | || || || || || || || || ||||| Sbjct 14105 CTAAACACTTTCTTTGTTTCTTTATGCAAGTTAGAGACAGCAATCCTTGCTGCCAGAATG 14164 Query 77399 GCATAGTCAGGATGTTGTGTAGTGCAGGTGGCTGCTATTTCTGCCGCTAAAGTATCTAAT 77458 ||||||||||| || | ||||| |||| || ||| |||| || || |||||||||| | Sbjct 14165 GCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTAGT 14224 Query 77459 TCTATAGTAGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 77504 || | ||||| || || | |||| ||||| || |||||||||| Sbjct 14225 TCCACGGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCATGG 14270 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 76994 GTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTG 77053 || || |||| ||| | || ||||| ||||| || |||||| | |||||||| || ||| Sbjct 9612 GTACCAGCATGAAAGAGAGTGGGAGAGGCATGGGTAAACCATCTCTCAGAAAGAAGGTTG 9671 Query 77054 TATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAAC 77113 |||||||||||| | || || ||||| || ||||| || |||| || | ||||| | Sbjct 9672 TATGTTTCAATAGCAGCATCAATATCTTCTTTGTGAATCCCCACAGATACCCTCATCAGC 9731 Query 77114 ATATGCTGAGGTCGTTC 77130 || || || |||| ||| Sbjct 9732 ATGTGTTGTGGTCTTTC 9748 Score = 86.0 bits (94), Expect = 9e-12 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| || ||||||||||| ||||||| ||||||||||||||| ||||||||||| ||| Sbjct 2007 TCAAAGTCCTCTCCCCAAACCTCATCCAGACCAGGACATTCATTTGGACACATCAAAGAC 2066 Query 76580 CA 76581 || Sbjct 2067 CA 2068 >seq36395 Length=32485 Score = 111 bits (122), Expect = 2e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711 |||||||||| ||||| | ||| || ||||| ||||| |||||||| || || | || | Sbjct 15295 CTTCATCTCTGCTAATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCT 15354 Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771 | | ||| |||||||| || ||||||||||| ||||| || ||||||||||| || || | Sbjct 15355 TTAACCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATTCCTTCTACAGCAGCAAAGG 15414 Query 46772 CGAC 46775 | || Sbjct 15415 CCAC 15418 Score = 86.0 bits (94), Expect = 9e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 47013 CAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAA 47072 |||||| |||||||| ||||||||||| ||||||||||| || || | || ||||| Sbjct 21441 CAAATTTTCATTCACAATTCCATCACTGGCAGCAAAAAAGGCTAAGATGTGAGAGATAAA 21500 Query 47073 ATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATA 47122 |||||| ||||| | | ||| | ||||||| | || ||| ||||||| Sbjct 21501 ATATTTCTCATCTGGTTTAAGTCTGTTCCAGTGAGGGAGATCCTTTGATA 21550 >seq63341 Length=12409 Score = 96.9 bits (106), Expect = 5e-15 Identities = 120/162 (74%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 75986 GCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTCGAAAATCTTCTTATT- 76044 || || || || || || || || || ||||||||||| ||||| || |||| |||||| Sbjct 8783 GCCAGATCACAGCTGGCTTCCAAGGCTCCGTAATAAATGGTTTCAAAGATCTGCTTATTC 8724 Query 76045 AAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAGAATAAATGCATCTGCTAG 76104 || | || | || || |||| ||||||||||| | |||||||| |||||||||| Sbjct 8723 AATAACT-GAGCCTCTGGACTCTCAAAAGGATATCTCATCAGAATAAAAGCATCTGCTAA 8665 Query 76105 TCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146 || || || ||||| ||||| || | ||| | ||||| || Sbjct 8664 ACCTTGTACCCCAATTCCAATGGGGCGATGGCGTTTATTTGA 8623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711215586455040