Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq40632 111 4e-19 seq66368 100 7e-16 seq184519 93.3 1e-13 >seq40632 Length=8250 Score = 111 bits (122), Expect = 4e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||| | |||||||||||| ||||||| ||||| |||||||| || | ||||| | Sbjct 8031 AGTCTCAACACAAGATGAAGAATAGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACAT 7972 Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006 | |||||| || ||| || || || || || || ||||| || | | ||||||||| Sbjct 7971 CTATCTTCCAGTTGTTTGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCC 7912 Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066 |||||||| || || || ||| | |||| |||||| || | |||||||| Sbjct 7911 TTTTCTTGGATCTTGGCCTTTACATTTTCTATTGCATCTGAAAGTTCAGCCTCAAGAGTG 7852 Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 ||||| || | | || || || | ||| | ||||||||| Sbjct 7851 ATAGTCTTCCTTGCAAGGGTTTTAATGAAAATCTGCATTTT 7811 >seq66368 Length=2842 Score = 100 bits (110), Expect = 7e-16 Identities = 155/218 (71%), Gaps = 10/218 (5%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAG--TTCTCCCAT 151950 ||||| || || ||||| |||||||| ||||||||||| |||| |||| | || | | Sbjct 506 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGG--AAAGGATACTTCTGT 563 Query 151951 CTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 |||| || || | || |||||| | ||||||||| || | || ||| || | || | Sbjct 564 CTTCCAGCTGCTTGCTGGTGAAGATCAACCTCTGCTGATCAGGCGGGATGCCCTTTTTGT 623 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAA 152067 |||| || || |||||| |||| | | |||| ||| ||| || || || || | Sbjct 624 CTTGGATCTTGGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTTA 680 Query 152068 TAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || || ||| | | ||||||| ||||| ||||||| Sbjct 681 TGGTCTTACCCTTCAAGGTCTTCATGAAGATCTGCATT 718 >seq184519 Length=2203 Score = 93.3 bits (102), Expect = 1e-13 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||||| ||| ||||| |||||||| || | | || | ||||| || | Sbjct 1413 CAAGGTGAAGAGTAGCCTCCTTTTGAATGTTGTAGTCAGACAGGGTACGTCCATCCTCCA 1472 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| || || ||||| || | | ||||||||||||||||| | Sbjct 1473 GTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTTTCTTGGA 1532 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| | ||| | ||||| || || ||||||| || || || | Sbjct 1533 TCTTGGCCTTTACATTTTCTGTTGTATCTGACAGTTCAACCTCAAGAGGGATGGTCTTCC 1592 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 || | || || ||||| || | |||||| || Sbjct 1593 CCATAAGGGTTTTCACAAAAATCTGCATCTT 1623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150969509769112