Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_033176.1 Length=224064 Score E Sequences producing significant alignments: (Bits) Value seq88220 170 3e-37 >seq88220 Length=24501 Score = 170 bits (188), Expect = 3e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 9256 GTCTGGAACAGTTGCTCGTCACTCCATTCTGGATGTTCTTGTTTCAGAACATCGCACACC 9315 |||||||||| |||| |||| ||||||||| || || | | | || ||||||||||| Sbjct 21172 GTCTGGAACAAGCGCTCATCACCCCATTCTGGGTGCTCCTCTCTAAGCACATCGCACACT 21231 Query 9316 CTGTTGTGTTCCCTGAGCCAGATAGTGGCGTACATCATGAGCCCAGGTACCAGGCCAAAA 9375 ||||||||||| | |||||||| ||||| |||||||| || || || |||||||| || Sbjct 21232 CTGTTGTGTTCTCGAAGCCAGATCGTGGCATACATCATCAGACCGGGCACCAGGCCGAAC 21291 Query 9376 GCCTCTTGACCGACAGCCAGACGCATGTTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9435 |||| || || ||||| | |||| || ||| || | | || || |||||||| | | Sbjct 21292 ACCTCCTGCCCCACAGCGAAGCGCAGGTGTTCAGGGATGTGAGGGGGGTAGATCATCTCC 21351 Query 9436 ACCTGGACGTCTTTGACCGAGGGGGGATACATTTCACCGTCAATCATCT 9484 ||||| ||||||||| | ||| || |||| ||| || ||||| |||| Sbjct 21352 ACCTGAGTGTCTTTGACTGTGGGCGGGTACACTTCCCCATCAATTATCT 21400 Score = 129 bits (142), Expect = 8e-25 Identities = 199/284 (70%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 8303 GGACACCCCTTGACGTTGCTACAGACTAGAGACTGAATAGTTGCGCTCTTGACGATCCCG 8362 ||||| || || ||||| | |||| || |||||||| | || | |||| ||| Sbjct 19633 GGACAGCCTTTCACGTTATTGCAGATAAGGGACTGAATTGAGGCAGTGTTGATGATTTTA 19692 Query 8363 AACCCCACGTCTCCGCCGAAGGTGCTGGGCTTCCAGTACCCCGGGGAGCAGATGACGTTC 8422 || || || ||||| || || ||||| || |||||||| || || || || || Sbjct 19693 AAGCCTACTTCTCCACCAAAAGTGCTAGGTTTCCAGTAGTGAGGAGAACATATAGGATTG 19752 Query 8423 GCCATGAGGCCTTTGAGGGAGAACGGAGCCCCCAACTCGAGAATGCTCTCACCGAAGATG 8482 |||| || ||||| | ||||||||| || || | || | ||| ||||||| |||||| Sbjct 19753 CCCATCAGTCCTTTCAAGGAGAACGGCGCTCCGAGTTCTACCATGGTCTCACCAAAGATG 19812 Query 8483 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAGCTCCACAGCCTCGACGTCT 8542 || | ||||| ||||||||||||| | | | |||||||||| || || | ||| Sbjct 19813 GCATCTGGACGAGGCTTTTCCACCAGAAGGGCAGGATACAGCTCCATGGCATCAATGTCA 19872 Query 8543 CCGTAAAGGGCCCTGAGTTCGGCAGCGATCTCCTTTTCTCCTGT 8586 || || ||||| | || ||||| || ||||| |||||||| Sbjct 19873 CCATAGAGGGCTTCTAACTCAGCAGCCATTTCCTTCTCTCCTGT 19916 Score = 116 bits (128), Expect = 5e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 9649 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 9708 |||||||||||| ||||||||| |||||| | || |||||| ||| ||| | || Sbjct 22184 TCTTACCCCATGATTCAGTCCTTTGGTGAAGCCTGGTCCTCGCTTATGATCTGTCTTGAA 22243 Query 9709 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 9768 ||||||||| ||||| || ||| |||| || || ||||| || || |||||||||||||| Sbjct 22244 AAACTGGTGGGTGAAGTGCTGGGCAAAGAACGCGAACATCAAATTTGTGCCCTGGGGATC 22303 Query 9769 GGGAGTGAAGGTCCTCCGAAGAAGAGTTTTTTCCACAACGTGTGCCGCATCCGGCAGCTT 9828 || | || | | | |||||| ||||||||||| | | ||| || |||| Sbjct 22304 AGGGATAAACTTTCCTCTTAGAAGAAATTTTTCCACAATCACTTTTGAATCAGGAAGCTC 22363 Query 9829 TGTTTTACCTGGTGAACGAGAACA 9852 | | || |||| || ||||||| Sbjct 22364 TTTCTTCCCTGCAAAATGAGAACA 22387 Score = 95.1 bits (104), Expect = 2e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 9908 TCACCTTTGACCCCAACAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 9967 |||||||| | || | |||||||| || || | || || ||||| ||| || | Sbjct 22784 TCACCTTTTATACCCATGGGAGTTGGGCAGTCATCAGCCACAGGAGGAAGAGCTCTGGTA 22843 Query 9968 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTATATG 10027 |||||||||||||| || || |||||||||||| || | |||| | ||||| | Sbjct 22844 TAATAGGAGAGATTAGAAAAGGCTTCCCAGCTTTTATAGCCATAGTGTACATTGTAAGTT 22903 Query 10028 GGAGGGCTGTCAATCAAATCGGATCTACCTGA 10059 || |||||||||||||||| |||||| |||| Sbjct 22904 GGCGGGCTGTCAATCAAATGTGATCTAGCTGA 22935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715148481722880