Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Megaderma_20lyra_20[genbank_20GCA_5F000465345.1_202013-09-14] 192,872 sequences; 1,735,931,796 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq22649 102 8e-17 seq52001 100 3e-16 seq66368 98.7 9e-16 >seq22649 Length=5672 Score = 102 bits (112), Expect = 8e-17 Identities = 150/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| |||| |||| ||| ||||| ||||||||||| ||||| || || | || || Sbjct 768 ACCAAGTGCACGGTGCACTCTTTCTGGATGTTATAGTCTGAGAGAGTACGGCCATCCTCC 709 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 ||||| ||||| | | ||||| |||| ||||| | || | || ||||||| | || Sbjct 708 AGCTGTTTGCCCACAGAAATCAGATGCTGCTGGTCAGGTGGGAGGCCCTCCTTG-GCTTG 650 Query 41774 ATTTTTTGCTTCAAC-GACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 |||| |||| || | | |||||| || | ||| ||||| | || || || || Sbjct 649 GATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGTGTGATGGTCTT 590 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| ||||| || || |||||||| Sbjct 589 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 560 >seq52001 Length=6774 Score = 100 bits (110), Expect = 3e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||||||||| ||||| |||||||| |||||||| |||| || Sbjct 6676 ACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGTCCGTCTTCC 6735 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 ||||||||||||||||| |||| | ||| ||||| Sbjct 6736 AGCTGCTTGCCGGCGAAGATCAACCTCTGCTGGTC 6770 >seq66368 Length=2842 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 ||||| ||||| ||| ||| ||||| ||||| |||||||| ||| | | ||| || Sbjct 509 ACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGATACTTCTGTCTTCC 568 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 |||||||||| || ||| |||| | ||| || || | || | || || ||||| | Sbjct 569 AGCTGCTTGCTGGTGAAGATCAACCTCTGCTGATCAGGCGGGATGCCCTTTTTGTCTTGG 628 Query 41774 ATTTTTTGCTTCAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTA 41833 || || ||| | | | ||||| || | ||||||||||| ||||| || ||| Sbjct 629 ATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTTATGGTCTTA 688 Query 41834 CCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| ||| ||||| | ||| |||||||| Sbjct 689 CCCTTCAAGGTCTTCATGAAGATCTGCAT 717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461189431286400