Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq558 131 1e-25 seq958 120 2e-22 seq571 120 2e-22 >seq558 Length=1532839 Score = 131 bits (144), Expect = 1e-25 Identities = 161/220 (73%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 26952 ACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGCATCTTCTCTAGCCTAAATGAA 27011 |||||||| || || || |||||||| ||| |||| ||||||||||| |||| || || Sbjct 1116544 ACAATGGGGGTGACACAGGTGCAGCCCACATTCACCAGCATCTTCTCCAGCCGGAAGGAT 1116485 Query 27012 TTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATCTCTTGTTGGATAGGGACTGAG 27071 |||||| | || | | |||||| || || ||||| || ||||| ||||||||| Sbjct 1116484 GGGGGGCAGTGCTGGGCCTCCCTGCGCAGGACCAGGATCTCCTGCTGGATGGGGACTGAG 1116425 Query 27072 TTCATGTGGTAGTCTACATTCCCATCAGCATTAACACATCCTAAGTAGCGACACTTTGCT 27131 |||| ||||| ||| | ||||| |||| | || || || | ||| |||||||| Sbjct 1116424 TTCAGGTGGTGGTCAATCTTCCCGTCAGGACCGACGCAGAACAAATGGCGGCACTTTGCC 1116365 Query 27132 TCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTGC 27171 ||||| |||||| ||| ||||| || | || | ||||| Sbjct 1116364 TCCCAGATCACATCGGGGTATCTCTCAGGGTCCTTATTGC 1116325 >seq958 Length=204405 Score = 120 bits (132), Expect = 2e-22 Identities = 93/111 (84%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 4056 AAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCAT 4115 ||| || |||||||||| ||||| |||||||||||| ||||||| |||||| || ||||| Sbjct 179334 AAGCTTATATTTCTCTAAATCAATTTCTGGAAAAAATGTGTCACTTTCAAATTCCTGCAT 179275 Query 4116 GATCCTAGTCACAAACAGTTTAAGATCGCATGGATAACTCATAGCTTCTTT 4166 |||||| |||||||||||| |||||| || ||| | |||| ||||| || Sbjct 179274 GATCCTTGTCACAAACAGTCTAAGATGGCCTGGCTTGTTCATGGCTTCCTT 179224 Score = 111 bits (122), Expect = 1e-19 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| ||||| | |||||||| | |||||| ||| | |||||||| || |||||||| || Sbjct 170553 CTTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGTCGATTCTTCTCGGG 170494 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398 ||| |||||||| ||||| ||||||||||||| |||||||| ||| || Sbjct 170493 AATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATTCTGCTTACCT 170445 >seq571 Length=8043696 Score = 120 bits (132), Expect = 2e-22 Identities = 102/126 (81%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224 ||||| ||||||| |||||| | |||||| |||||||| |||||||||| ||||||||| Sbjct 5622205 TTATAAACAGAACCACCTCCTACTATCCAAACCATGTCCACTTTATTTGTTAATTCTGGT 5622146 Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284 | || |||||||||| |||||||| | ||| || || | ||||||||||| | |||| Sbjct 5622145 TCCTCAATAAGTTTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGAGCTCCTTTTGGA 5622086 Query 4285 AGCTCC 4290 | ||| Sbjct 5622085 GGTTCC 5622080 Score = 118 bits (130), Expect = 8e-22 Identities = 98/120 (82%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224 ||||| ||||||| |||||| | |||||| |||||||| |||||||||| ||||||||| Sbjct 5619764 TTATAAACAGAACCACCTCCTACTATCCAAACCATGTCCACTTTATTTGTTAATTCTGGT 5619705 Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284 | || |||||||||| |||||||| | ||| || || | ||||||||||| | |||| Sbjct 5619704 TCCTCAATAAGTTTTAAGGCATCATCCAGACTTTTGGCAAGAAAATGAGCTCCTTTTGGA 5619645 Score = 95.1 bits (104), Expect = 9e-15 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 4053 CAAAAGTTTGTATTTCTCTAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTG 4112 || |||||| |||||||| | ||||| ||||||||||| ||||||| |||||| || || Sbjct 5624338 CAGAAGTTTATATTTCTCCAAATCAATATCTGGAAAAAATGTGTCACTTTCAAATTCCTG 5624279 Query 4113 CATGATCCTAGTCACAAACAGTTTAAGATCGC 4144 ||||||||| |||||||| | | | |||| || Sbjct 5624278 CATGATCCTTGTCACAAATAATCTGAGATGGC 5624247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361245612911519