Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq373 87.8 2e-12 seq323 82.4 7e-11 >seq373 Length=2877171 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 ||||| |||||||| |||||||| ||||| |||||||||||| ||| || | || Sbjct 2152340 GATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGAC 2152399 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 ||||| ||||| ||||| || |||||||| || ||||| Sbjct 2152400 TACAACATTCAAAAGGACTCCACTCTTCATATTGTGTT 2152437 >seq323 Length=3567780 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 28956 GTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAA 29015 || ||||||||||| ||| | || || ||||| ||||| ||||| ||| || ||| Sbjct 1427257 GTCAAAATGCAAATCTTCGTGAAGACCTTGACCGGCAAGACCATCACCCTGGAGGTGGAG 1427198 Query 29016 CCCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTA 29075 ||| || || | | || | ||| || || ||||||||||| | ||| Sbjct 1427197 CCCAGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCT 1427138 Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 || || || || || |||||||| ||||| || ||||||||| | ||| | | || Sbjct 1427137 GACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGAC 1427078 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGT 29170 ||||| || ||||| || || || || ||| |||| Sbjct 1427077 TACAACATCCAGAAAGAGTCCACCCTGCACCTGGT 1427043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428329375382195