Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22]
1,269 sequences; 1,803,099,001 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq633 118 1e-21
seq490 113 5e-20
seq1015 100 3e-16
seq425 100 3e-16
seq971 98.7 1e-15
seq323 96.9 4e-15
seq572 95.1 1e-14
seq829 82.4 9e-11
>seq633
Length=1155427
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
|||||| |||| ||| ||| || ||||||||||| || | ||||| || | || ||
Sbjct 85020 CACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGCGGCCATCCTC 84961
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
|||||| || || || || || || ||||||||||| | || || |||||||||
Sbjct 84960 TAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGGTGCCCTCCTTGTCTTG 84901
Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
||||||| | ||| || | | ||||| || | || || || | |||||||| ||
Sbjct 84900 GATTTTTGCTCTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTT 84841
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
||| || || ||||| |||||||| |||||
Sbjct 84840 GCCAGTCAGGGTCTTCACAAAGATCTGCAT 84811
>seq490
Length=1953878
Score = 113 bits (124), Expect = 5e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033
|||||| |||| ||| ||| || || |||||||| || | ||||| || | || ||
Sbjct 846154 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCTGAGAGAGTGCGGCCATCCTC 846213
Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093
||||| || ||||| || || || ||||||||||| | ||| | || |||| |||
Sbjct 846214 CAGCTGTTTGCCAGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTG 846273
Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153
||| || ||||| || | |||||||| | || || |||| |||||||| ||
Sbjct 846274 GATCTTAGCTTTGACACTCTCAGTGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTT 846333
Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|||||| || ||||| || ||||| |||||
Sbjct 846334 GCCCGTCAGGGTCTTCACGAAGATCTGCAT 846363
>seq1015
Length=5846585
Score = 100 bits (110), Expect = 3e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 885325 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 885384
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 885385 ATACTAACGAGGA 885397
>seq425
Length=2362534
Score = 100 bits (110), Expect = 3e-16
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124
||||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 1414108 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1414049
Query 60125 ATACTACCGAGGA 60137
|||||| ||||||
Sbjct 1414048 ATACTAACGAGGA 1414036
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1411657 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1411598
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 1411597 TACTAACGAGGA 1411586
>seq971
Length=5909219
Score = 98.7 bits (108), Expect = 1e-15
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 1832570 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1832629
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 1832630 TACTAACGAGGA 1832641
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | |||||| |||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 74024 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 74083
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 74084 TACTAACGAGGA 74095
>seq323
Length=3567780
Score = 96.9 bits (106), Expect = 4e-15
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028
|||| |||| |||| ||| ||| || || || ||||| |||| ||||| || |
Sbjct 1427037 CGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 1427096
Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088
|| || |||||||| || || || ||||| | ||||||||| | || | || || ||
Sbjct 1427097 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTA 1427156
Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148
||| ||| || || | || | | ||||| || | ||||| || | ||||||
Sbjct 1427157 TCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 1427216
Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTAC 43189
|| ||||| || | ||||| || |||||||||||||| ||
Sbjct 1427217 GTCTTGCCGGTCAAGGTCTTCACGAAGATTTGCATTTTGAC 1427257
>seq572
Length=1482142
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125
|||| || | ||||||||||||| ||||||||||||||||||||| ||||| |||||||
Sbjct 351067 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 351008
Query 60126 TACTACCGAGGA 60137
||||| ||||||
Sbjct 351007 TACTAACGAGGA 350996
>seq829
Length=480269
Score = 82.4 bits (90), Expect = 9e-11
Identities = 143/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 42976 CCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTA 43035
|||| ||||| ||| ||| || ||||||||||| || | ||| | || || ||||
Sbjct 47461 CCAAGTGCAAGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAATGTGCCTATCCTCTA 47402
Query 43036 GCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGA 43095
|||| || || | || || || |||| ||||| | | | | || ||||||||| ||
Sbjct 47401 GCTGTTTGCCCACAAAAATTAGATGCTGTTGGTCAGGCAGGATGCCCTCCTTGTCTTGGA 47342
Query 43096 TTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGC 43155
|||| |||| || | ||| | || | || || || | |||||||| ||||
Sbjct 47341 TTTTAGCTTTGGCATTCTCAGTGGTGCCACTGGGCTCAACCTCAAGGGTGATGGTCTTGC 47282
Query 43156 CCGTTAGCGTCTTTACAAAGATTTGCAT 43183
| || || ||||| ||||||| |||||
Sbjct 47281 CAGTCAGGATCTTTGCAAAGATCTGCAT 47254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571808529543320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |