Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq633 118 1e-21 seq490 113 5e-20 seq1015 100 3e-16 seq425 100 3e-16 seq971 98.7 1e-15 seq323 96.9 4e-15 seq572 95.1 1e-14 seq829 82.4 9e-11 >seq633 Length=1155427 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| ||| ||| || ||||||||||| || | ||||| || | || || Sbjct 85020 CACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAGTGCGGCCATCCTC 84961 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 |||||| || || || || || || ||||||||||| | || || ||||||||| Sbjct 84960 TAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGGTGCCCTCCTTGTCTTG 84901 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||||||| | ||| || | | ||||| || | || || || | |||||||| || Sbjct 84900 GATTTTTGCTCTGACATTCTCAATAGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTT 84841 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || ||||| |||||||| ||||| Sbjct 84840 GCCAGTCAGGGTCTTCACAAAGATCTGCAT 84811 >seq490 Length=1953878 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||| |||| ||| ||| || || |||||||| || | ||||| || | || || Sbjct 846154 CACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCTGAGAGAGTGCGGCCATCCTC 846213 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 ||||| || ||||| || || || ||||||||||| | ||| | || |||| ||| Sbjct 846214 CAGCTGTTTGCCAGCAAAAATCAGGCGCTGCTGGTCAGGCGGGATGCCCTCCCGGTCTTG 846273 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||| || ||||| || | |||||||| | || || |||| |||||||| || Sbjct 846274 GATCTTAGCTTTGACACTCTCAGTGGTGTCGCTGGGCTCGACCTCGAGGGTGATGGTCTT 846333 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||| || ||||| || ||||| ||||| Sbjct 846334 GCCCGTCAGGGTCTTCACGAAGATCTGCAT 846363 >seq1015 Length=5846585 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 885325 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 885384 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 885385 ATACTAACGAGGA 885397 >seq425 Length=2362534 Score = 100 bits (110), Expect = 3e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 60065 TCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 60124 ||||| || | ||||||||||||| ||||||||||||||||||||| |||||||||||| Sbjct 1414108 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACT 1414049 Query 60125 ATACTACCGAGGA 60137 |||||| |||||| Sbjct 1414048 ATACTAACGAGGA 1414036 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1411657 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1411598 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 1411597 TACTAACGAGGA 1411586 >seq971 Length=5909219 Score = 98.7 bits (108), Expect = 1e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1832570 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1832629 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 1832630 TACTAACGAGGA 1832641 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | |||||| |||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 74024 CTCCCCGTCGGGGAATTGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 74083 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 74084 TACTAACGAGGA 74095 >seq323 Length=3567780 Score = 96.9 bits (106), Expect = 4e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| |||| |||| ||| ||| || || || ||||| |||| ||||| || | Sbjct 1427037 CGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCA 1427096 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| || || || ||||| | ||||||||| | || | || || || Sbjct 1427097 TCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTA 1427156 Query 43089 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 43148 ||| ||| || || | || | | ||||| || | ||||| || | |||||| Sbjct 1427157 TCCTGGATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 1427216 Query 43149 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTTTAC 43189 || ||||| || | ||||| || |||||||||||||| || Sbjct 1427217 GTCTTGCCGGTCAAGGTCTTCACGAAGATTTGCATTTTGAC 1427257 >seq572 Length=1482142 Score = 95.1 bits (104), Expect = 1e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 351067 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 351008 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 351007 TACTAACGAGGA 350996 >seq829 Length=480269 Score = 82.4 bits (90), Expect = 9e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 42976 CCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTA 43035 |||| ||||| ||| ||| || ||||||||||| || | ||| | || || |||| Sbjct 47461 CCAAGTGCAAGGTGGACTCTTTCTGAATATTGTAGTCTGAGAGAATGTGCCTATCCTCTA 47402 Query 43036 GCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGA 43095 |||| || || | || || || |||| ||||| | | | | || ||||||||| || Sbjct 47401 GCTGTTTGCCCACAAAAATTAGATGCTGTTGGTCAGGCAGGATGCCCTCCTTGTCTTGGA 47342 Query 43096 TTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGC 43155 |||| |||| || | ||| | || | || || || | |||||||| |||| Sbjct 47341 TTTTAGCTTTGGCATTCTCAGTGGTGCCACTGGGCTCAACCTCAAGGGTGATGGTCTTGC 47282 Query 43156 CCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || ||||| ||||||| ||||| Sbjct 47281 CAGTCAGGATCTTTGCAAAGATCTGCAT 47254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571808529543320