Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq373 86.0 9e-12 seq1204 84.2 3e-11 >seq373 Length=2877171 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/134 (75%), Gaps = 2/134 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | |||||| || || | ||| | ||| || || ||| || || || || || || Sbjct 2152452 CCACCACAAAGTCTCAACACAATATGAAGAGTGGAGTCCTTTTGA-ATGTTGTAGTCAGA 2152394 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || | ||| || |||||||| |||| |||||||||||| |||| Sbjct 2152393 CAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGT 2152334 Query 146170 AATTCCTTCTTTAT 146183 ||||||||| |||| Sbjct 2152333 AATTCCTTCCTTAT 2152320 >seq1204 Length=5112296 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| |||||| || || | ||| | ||| || || ||| || ||||||| || || Sbjct 4284404 CCACCATGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGA-ATATTATGGTCAGA 4284346 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 | ||| | | ||| || | ||| || | |||||| |||| |||||||||||| ||| | Sbjct 4284345 CAAAGTACATCCATCTTCCAGTTGCTTGCTAGCAAAGATCAGTCTTTGCTGATCAGGAAG 4284286 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||| ||||| || Sbjct 4284285 AATTCCTTCCTTATCCTG 4284268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743514605812480