Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22]
1,269 sequences; 1,803,099,001 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq981 111 1e-19
seq633 89.7 5e-13
seq490 86.0 6e-12
seq342 84.2 2e-11
seq918 82.4 7e-11
>seq981
Length=171841
Score = 111 bits (122), Expect = 1e-19
Identities = 114/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
||||| |||||| || || ||||| ||||| || || || |||||||| || |||||
Sbjct 93203 ACCTCATCTTTGCTGGTATATTCTACTATTTCTGTGCACAGGTTGCTACATTTGATCGTT 93262
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
|||| || ||||||||| || ||||| || ||||| ||||| ||||||||||| ||
Sbjct 93263 CCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAAAGCATGTACGGGGTA 93322
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196
|| ||||| ||| ||||| || || ||
Sbjct 93323 CCTGTCTCTGTCTGAGACTCAATAATGGC 93351
>seq633
Length=1155427
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| ||||| ||||| || |||||| | || ||||| ||
Sbjct 84811 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 84870
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | |||| | | ||| |||||||| ||| || || ||||||
Sbjct 84871 GACACTATTGAGAATGTCAGAGCAAAAATCCAAGACAAGGAGGGCACCCCACCTGACCAG 84930
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || || ||||||||| | || || ||| | || || ||
Sbjct 84931 CAGCGTCTGATTTTTGCGGGCAAACAGCTAGAGGATGGCCGCACTCTCTCAGACTACAAT 84990
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419
||||| ||||| || || || || |||| ||| |||||||| ||
Sbjct 84991 ATTCAGAAAGAGTCCACCCTGCACTTGGTGCTTCCTCTGAGGGGTGG 85037
>seq490
Length=1953878
Score = 86.0 bits (94), Expect = 6e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| ||||| ||||| || |||||| |||| || || || |
Sbjct 846363 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGC 846304
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| || | |||||| | || ||| ||| ||| | ||||| ||||||
Sbjct 846303 GACACCACTGAGAGTGTCAAAGCTAAGATCCAAGACCGGGAGGGCATCCCGCCTGACCAG 846244
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||| || || || |||||||||||| |||| ||
Sbjct 846243 CAGCGCCTGATTTTTGCTGGCAAACAGCTGGAGGA 846209
>seq342
Length=3255032
Score = 84.2 bits (92), Expect = 2e-11
Identities = 108/149 (72%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 31199 ATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGT 31258
|| ||||| ||||| ||||| ||||| || |||||||| |||| ||| || ||||
Sbjct 1808117 ATCTTCGTGAAGACGCTGACTGGCAAGACCATCACCGTGGACGGTGAGCCCAGTGACACC 1808176
Query 31259 GTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGT 31318
|| | ||||| | ||| |||| ||| ||| | ||||| ||||| ||||||
Sbjct 1808177 ACTGAGAGTATCAAAGCAAAAATCCAAGACAGGGAGGGCATCCCGCCTGACCAACAGCGT 1808236
Query 31319 CTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||||| || | |||||||||| |||| ||
Sbjct 1808237 CTAATTTTTGTTGGCAAACAGCTGGAGGA 1808265
>seq918
Length=272934
Score = 82.4 bits (90), Expect = 7e-11
Identities = 153/222 (69%), Gaps = 6/222 (3%)
Strand=Plus/Minus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| | |||| | |||||||| | || || || |||| |||| ||| ||||
Sbjct 214111 AAGATGCAGACTTTCATGAAGACTCTTATGGGGAAGACTGTCACTCTCGAGGTTAAACCC 214052
Query 31250 TCCGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308
|| || | | |||| ||| || | |||| | ||| |||||| | || || ||
Sbjct 214051 TCGGATACAATAGAAAAGGTAAAGGCCGAGA-TCCAGGAAAAGGAA----TTCCTCCTGA 213997
Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368
||||| | || || || |||||||| || ||| |||| ||| || || ||
Sbjct 213996 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGGAGACGGACCTACTTTGTCTGACTA 213937
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
| ||||||||| || |||||||||||||| || || |||||
Sbjct 213936 CAGCATTCAAAAGGAGTCGACTCTTCATCTTGTGCTGAGACT 213895
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445759329030480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |