Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq981 111 1e-19 seq633 89.7 5e-13 seq490 86.0 6e-12 seq342 84.2 2e-11 seq918 82.4 7e-11 >seq981 Length=171841 Score = 111 bits (122), Expect = 1e-19 Identities = 114/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107 ||||| |||||| || || ||||| ||||| || || || |||||||| || ||||| Sbjct 93203 ACCTCATCTTTGCTGGTATATTCTACTATTTCTGTGCACAGGTTGCTACATTTGATCGTT 93262 Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167 |||| || ||||||||| || ||||| || ||||| ||||| ||||||||||| || Sbjct 93263 CCCAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAAAGCATGTACGGGGTA 93322 Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196 || ||||| ||| ||||| || || || Sbjct 93323 CCTGTCTCTGTCTGAGACTCAATAATGGC 93351 >seq633 Length=1155427 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||| ||||| ||||| || |||||| | || ||||| || Sbjct 84811 ATGCAGATCTTTGTGAAGACCCTGACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGT 84870 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | | || | |||| | | ||| |||||||| ||| || || |||||| Sbjct 84871 GACACTATTGAGAATGTCAGAGCAAAAATCCAAGACAAGGAGGGCACCCCACCTGACCAG 84930 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || || ||||||||| | || || ||| | || || || Sbjct 84931 CAGCGTCTGATTTTTGCGGGCAAACAGCTAGAGGATGGCCGCACTCTCTCAGACTACAAT 84990 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGG 31419 ||||| ||||| || || || || |||| ||| |||||||| || Sbjct 84991 ATTCAGAAAGAGTCCACCCTGCACTTGGTGCTTCCTCTGAGGGGTGG 85037 >seq490 Length=1953878 Score = 86.0 bits (94), Expect = 6e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| ||||| ||||| || |||||| |||| || || || | Sbjct 846363 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGCCCAGC 846304 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| || | |||||| | || ||| ||| ||| | ||||| |||||| Sbjct 846303 GACACCACTGAGAGTGTCAAAGCTAAGATCCAAGACCGGGAGGGCATCCCGCCTGACCAG 846244 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| || || || |||||||||||| |||| || Sbjct 846243 CAGCGCCTGATTTTTGCTGGCAAACAGCTGGAGGA 846209 >seq342 Length=3255032 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 31199 ATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGT 31258 || ||||| ||||| ||||| ||||| || |||||||| |||| ||| || |||| Sbjct 1808117 ATCTTCGTGAAGACGCTGACTGGCAAGACCATCACCGTGGACGGTGAGCCCAGTGACACC 1808176 Query 31259 GTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGT 31318 || | ||||| | ||| |||| ||| ||| | ||||| ||||| |||||| Sbjct 1808177 ACTGAGAGTATCAAAGCAAAAATCCAAGACAGGGAGGGCATCCCGCCTGACCAACAGCGT 1808236 Query 31319 CTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||| || | |||||||||| |||| || Sbjct 1808237 CTAATTTTTGTTGGCAAACAGCTGGAGGA 1808265 >seq918 Length=272934 Score = 82.4 bits (90), Expect = 7e-11 Identities = 153/222 (69%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| | |||| | |||||||| | || || || |||| |||| ||| |||| Sbjct 214111 AAGATGCAGACTTTCATGAAGACTCTTATGGGGAAGACTGTCACTCTCGAGGTTAAACCC 214052 Query 31250 TCCGACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGA 31308 || || | | |||| ||| || | |||| | ||| |||||| | || || || Sbjct 214051 TCGGATACAATAGAAAAGGTAAAGGCCGAGA-TCCAGGAAAAGGAA----TTCCTCCTGA 213997 Query 31309 CCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTA 31368 ||||| | || || || |||||||| || ||| |||| ||| || || || Sbjct 213996 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGGAGACGGACCTACTTTGTCTGACTA 213937 Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410 | ||||||||| || |||||||||||||| || || ||||| Sbjct 213936 CAGCATTCAAAAGGAGTCGACTCTTCATCTTGTGCTGAGACT 213895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445759329030480