Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq981 122 1e-22 seq366 114 2e-20 seq25 102 1e-16 seq353 93.3 5e-14 >seq981 Length=171841 Score = 122 bits (134), Expect = 1e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || |||||||| ||||| ||||| |||||||| || || ||||| || ||||| | Sbjct 76934 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTGTAAGGTTCAATG 76993 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 |||||||||||||||| ||| |||||||| || ||||| ||||| || || | | |||| Sbjct 76994 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAAGAAGTAAA 77053 Query 62508 CTATTTCTAAGACCGTA 62524 || ||||| | ||| || Sbjct 77054 CTGTTTCTTATACCATA 77070 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172 |||| ||||| || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 74640 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 74699 Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232 ||| ||| || ||||| || ||||| || || || || || ||||| || | | || | Sbjct 74700 TCAAAGACTGGCTTTGGTCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACGGTTT 74759 Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGT-TTGTA 62291 | || | |||||||| | ||||||||||| | |||| | || || |||| | | ||| Sbjct 74760 TCTGAGAGATTTCCCATACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAATTTCTGGTA 74819 Query 62292 T--TCTGAATGGA 62302 | |||||| ||| Sbjct 74820 TGGTCTGAAGGGA 74832 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 62628 TATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAA 62687 || || |||||||| || | || | || || | ||| || || || || || || ||| Sbjct 88055 TAGGTTTCATATGGGCCATGCTCCCTGGCCAGATCACAGCTGGCTTCCAAAGCTCCATAA 88114 Query 62688 TAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 62747 ||||||||||||||||| | |||||| | || || || || || ||||| ||||| Sbjct 88115 TAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATAC 88174 Query 62748 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62807 | | |||||||| || || || | ||||| || ||||| || || || | ||| | Sbjct 88175 CTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGCGT 88234 Query 62808 TTATTAGA 62815 ||||| || Sbjct 88235 TTATTTGA 88242 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322 || |||||||||||| |||||||| ||||||||||| || | || || || || | | Sbjct 94555 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 94614 Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382 ||||| || |||||||| ||||| || | ||| || ||| | | || || ||||||| Sbjct 94615 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCA 94674 Query 63383 CGGTTCCAAGTATATGGC 63400 || |||| ||| || || Sbjct 94675 AGGCTCCAGGTAAATAGC 94692 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 64006 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAA 64065 |||| |||| ||| |||||||| ||||| | || || | || || | || || |||| Sbjct 107603 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCGTGCTGCCAGAA 107662 Query 64066 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64125 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 107663 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCCGCTGTTTCAGCAGCCAAAGTATCTA 107722 Query 64126 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64171 ||| || || || || ||| | |||| ||||| || || ||||| Sbjct 107723 GTTCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 107768 >seq366 Length=2959005 Score = 114 bits (126), Expect = 2e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| ||||| ||||| | |||||| ||||||||||| || ||||| || || ||||| | Sbjct 58966 CCTCATCTCTGCTAATGAGTTCGTTGGAAAACGTGAGGCCAGGCATCAGTCCCCGCTTCT 59025 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | ||||| || || || || || || || ||||||||||| ||||| || |||||||| | Sbjct 59026 TGAGCCAGAAAATTGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACCGCAGCAAAAG 59085 Query 33724 CAATAAGTCTCTCTCC 33739 | | || | |||||| Sbjct 59086 CTACAACACGCTCTCC 59101 >seq25 Length=4797499 Score = 102 bits (112), Expect = 1e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548 |||||||||||||||| ||| || | |||||||| | |||||||||||||| ||| Sbjct 2527106 GTTACTTTCTATGATGTATATATTATTCTGCAAGCTTTTGTATTGACTACTGCAGTATTT 2527165 Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607 |||| | |||||| | ||| ||||| || |||| ||||||||| ||| ||| | |||| Sbjct 2527166 CTTGGTTTGACTATGTATACCCTACAGTCTAAGAAAGATTTCAGCAAATTTGGAGCAGG 2527224 Score = 89.7 bits (98), Expect = 6e-13 Identities = 83/104 (80%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 188241 GCATTTCTAAGAAAAGTCTACGGTATCCTTG-TCTACAATTTCCTTTAACAACGGCAACA 188299 || |||||||||||||||||| | |||||| ||| ||| ||| ||||| || | ||| Sbjct 2520319 GCCTTTCTAAGAAAAGTCTACAGCATCCTTTCTCTGCAAATTCTCTTAACTACAGTGACA 2520378 Query 188300 GCTGCAGTATTTTTATACTTTGAATGCATTCGGACATTTATACA 188343 ||||| | |||||||||||||| | || ||||||||| |||| Sbjct 2520379 TCTGCATTTTTTTTATACTTTGAGTCTATACGGACATTTGTACA 2520422 >seq353 Length=3050693 Score = 93.3 bits (102), Expect = 5e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665 || ||||| || || | ||| || ||||| |||||||| ||||| || || | || || Sbjct 2773741 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCTTT 2773800 Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 | ||| ||||| | ||| || ||||| || ||||| | ||||||||| ||||||||||| Sbjct 2773801 AACCAGAATATAGCAGCAAACGATCCCGAGAAGAAAACTCCTTCTACAGCAGCAAAGGC 2773859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629807609518320