Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22]
1,269 sequences; 1,803,099,001 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq981 122 1e-22
seq366 114 2e-20
seq25 102 1e-16
seq353 93.3 5e-14
>seq981
Length=171841
Score = 122 bits (134), Expect = 1e-22
Identities = 109/137 (80%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447
|| || |||||||| ||||| ||||| |||||||| || || ||||| || ||||| |
Sbjct 76934 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTGTAAGGTTCAATG 76993
Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507
|||||||||||||||| ||| |||||||| || ||||| ||||| || || | | ||||
Sbjct 76994 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAAGAAGTAAA 77053
Query 62508 CTATTTCTAAGACCGTA 62524
|| ||||| | ||| ||
Sbjct 77054 CTGTTTCTTATACCATA 77070
Score = 107 bits (118), Expect = 2e-18
Identities = 141/193 (73%), Gaps = 3/193 (2%)
Strand=Plus/Plus
Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172
|||| ||||| || |||||||| || |||||| ||| | || || || |||||||| |
Sbjct 74640 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 74699
Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232
||| ||| || ||||| || ||||| || || || || || ||||| || | | || |
Sbjct 74700 TCAAAGACTGGCTTTGGTCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACGGTTT 74759
Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGT-TTGTA 62291
| || | |||||||| | ||||||||||| | |||| | || || |||| | | |||
Sbjct 74760 TCTGAGAGATTTCCCATACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAATTTCTGGTA 74819
Query 62292 T--TCTGAATGGA 62302
| |||||| |||
Sbjct 74820 TGGTCTGAAGGGA 74832
Score = 91.5 bits (100), Expect = 2e-13
Identities = 133/188 (71%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 62628 TATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAA 62687
|| || |||||||| || | || | || || | ||| || || || || || || |||
Sbjct 88055 TAGGTTTCATATGGGCCATGCTCCCTGGCCAGATCACAGCTGGCTTCCAAAGCTCCATAA 88114
Query 62688 TAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 62747
||||||||||||||||| | |||||| | || || || || || ||||| |||||
Sbjct 88115 TAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATAC 88174
Query 62748 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62807
| | |||||||| || || || | ||||| || ||||| || || || | ||| |
Sbjct 88175 CTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGCGT 88234
Query 62808 TTATTAGA 62815
||||| ||
Sbjct 88235 TTATTTGA 88242
Score = 91.5 bits (100), Expect = 2e-13
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322
|| |||||||||||| |||||||| ||||||||||| || | || || || || | |
Sbjct 94555 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 94614
Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382
||||| || |||||||| ||||| || | ||| || ||| | | || || |||||||
Sbjct 94615 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCA 94674
Query 63383 CGGTTCCAAGTATATGGC 63400
|| |||| ||| || ||
Sbjct 94675 AGGCTCCAGGTAAATAGC 94692
Score = 87.8 bits (96), Expect = 2e-12
Identities = 119/166 (72%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 64006 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAA 64065
|||| |||| ||| |||||||| ||||| | || || | || || | || || ||||
Sbjct 107603 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCGTGCTGCCAGAA 107662
Query 64066 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64125
||||||| || || || | ||||| | || || ||| |||| || |||| ||| || |
Sbjct 107663 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCCGCTGTTTCAGCAGCCAAAGTATCTA 107722
Query 64126 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64171
||| || || || || ||| | |||| ||||| || || |||||
Sbjct 107723 GTTCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 107768
>seq366
Length=2959005
Score = 114 bits (126), Expect = 2e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663
|||| ||||| ||||| | |||||| ||||||||||| || ||||| || || ||||| |
Sbjct 58966 CCTCATCTCTGCTAATGAGTTCGTTGGAAAACGTGAGGCCAGGCATCAGTCCCCGCTTCT 59025
Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723
| ||||| || || || || || || || ||||||||||| ||||| || |||||||| |
Sbjct 59026 TGAGCCAGAAAATTGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACCGCAGCAAAAG 59085
Query 33724 CAATAAGTCTCTCTCC 33739
| | || | ||||||
Sbjct 59086 CTACAACACGCTCTCC 59101
>seq25
Length=4797499
Score = 102 bits (112), Expect = 1e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548
|||||||||||||||| ||| || | |||||||| | |||||||||||||| |||
Sbjct 2527106 GTTACTTTCTATGATGTATATATTATTCTGCAAGCTTTTGTATTGACTACTGCAGTATTT 2527165
Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607
|||| | |||||| | ||| ||||| || |||| ||||||||| ||| ||| | ||||
Sbjct 2527166 CTTGGTTTGACTATGTATACCCTACAGTCTAAGAAAGATTTCAGCAAATTTGGAGCAGG 2527224
Score = 89.7 bits (98), Expect = 6e-13
Identities = 83/104 (80%), Gaps = 1/104 (1%)
Strand=Plus/Plus
Query 188241 GCATTTCTAAGAAAAGTCTACGGTATCCTTG-TCTACAATTTCCTTTAACAACGGCAACA 188299
|| |||||||||||||||||| | |||||| ||| ||| ||| ||||| || | |||
Sbjct 2520319 GCCTTTCTAAGAAAAGTCTACAGCATCCTTTCTCTGCAAATTCTCTTAACTACAGTGACA 2520378
Query 188300 GCTGCAGTATTTTTATACTTTGAATGCATTCGGACATTTATACA 188343
||||| | |||||||||||||| | || ||||||||| ||||
Sbjct 2520379 TCTGCATTTTTTTTATACTTTGAGTCTATACGGACATTTGTACA 2520422
>seq353
Length=3050693
Score = 93.3 bits (102), Expect = 5e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 33606 TCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33665
|| ||||| || || | ||| || ||||| |||||||| ||||| || || | || ||
Sbjct 2773741 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCTTT 2773800
Query 33666 AGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724
| ||| ||||| | ||| || ||||| || ||||| | ||||||||| |||||||||||
Sbjct 2773801 AACCAGAATATAGCAGCAAACGATCCCGAGAAGAAAACTCCTTCTACAGCAGCAAAGGC 2773859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629807609518320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |