Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq25 176 6e-39 seq981 125 9e-24 seq366 120 4e-22 >seq25 Length=4797499 Score = 176 bits (194), Expect = 6e-39 Identities = 174/224 (78%), Gaps = 2/224 (1%) Strand=Plus/Minus Query 9209 TTAATTCTATTTTAAACTTTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAA 9268 ||| ||| ||||| | | | || ||||||| | ||||||||| | ||||| |||| Sbjct 2535214 TTATTTCCATTTTCAG--TCACTTTTTATTAGCTGCTTCCAAAAATCGCAACAGGTGCAG 2535157 Query 9269 GAACAGATTGATGATATCCAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGA 9328 ||| |||||||||||||||||||| | ||||| | ||||| ||||| || ||||| || Sbjct 2535156 GAAAAGATTGATGATATCCAAGTAAAGGTTGATGGCAGCTAATACATATTCCTCAGGTGA 2535097 Query 9329 GAGCTTATGTATTAGTGAGTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCC 9388 ||| |||| || |||||||| ||||||||||| |||||||| ||||| | |||||| || Sbjct 2535096 CAGCCTATGCATCAGTGAGTGTGTGTCATAGATGATGAATCCACAGAAAAGAAGGGCTCC 2535037 Query 9389 AAAAGCAGACAGGACCAGCTCCACTGTTTCACTTTGCACAAATA 9432 | ||||| || ||||| |||| ||| ||||| | | ||||| Sbjct 2535036 TACAGCAGCCACGACCAATTCCAGTGTCTCACTATAAAAAAATA 2534993 Score = 116 bits (128), Expect = 5e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||||| ||| ||||||||| |||| || ||||| ||||| ||||| | ||||| Sbjct 2527224 CCTGCTCCAAATTTGCTGAAATCTTTCTTAGACTGTAGGGTATACATAGTCAAACCAAGA 2527165 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || ||||||||||||| | |||||||||| || | || ||||||||||||||||| Sbjct 2527164 AATACTGCAGTAGTCAATACAAAAGCTTGCAGAATAATATATACATCATAGAAAGTAAC 2527106 Score = 93.3 bits (102), Expect = 6e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 9744 TGTATAATTTTCCGCATGCAGTCAAAGTATAAAAATACTGCAGTTGTTGCCGTTGTTAAA 9803 |||| || | |||| || | |||||||||||||| | ||||| ||| | || ||||| Sbjct 2520422 TGTACAAATGTCCGTATAGACTCAAAGTATAAAAAAAATGCAGATGTCACTGTAGTTAAG 2520363 Query 9804 AGAAATTGTAGACAAAGGATACCGTAGACTTTTCTTAGAAATGC 9847 |||| ||| ||| ||||||| | |||||||||||||||||| || Sbjct 2520362 AGAATTTGCAGAGAAAGGATGCTGTAGACTTTTCTTAGAAAGGC 2520319 >seq981 Length=171841 Score = 125 bits (138), Expect = 9e-24 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| ||||| ||||| |||||||| || || ||||| || ||||| | Sbjct 76934 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTGTAAGGTTCAATG 76993 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 |||||||||||||||| ||| |||||||| || ||||| ||||| || || | | |||| Sbjct 76994 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAAGAAGTAAA 77053 Query 65301 CTATTTCTAAGACCGTA 65317 || ||||| | ||| || Sbjct 77054 CTGTTTCTTATACCATA 77070 Score = 107 bits (118), Expect = 3e-18 Identities = 141/193 (73%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| ||||| || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 74640 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 74699 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 ||| ||| || ||||| || ||||| || || || || || ||||| || | | || | Sbjct 74700 TCAAAGACTGGCTTTGGTCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACGGTTT 74759 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGT-TTGTA 65084 | || | |||||||| | ||||||||||| | |||| | || || |||| | | ||| Sbjct 74760 TCTGAGAGATTTCCCATACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAATTTCTGGTA 74819 Query 65085 T--TCTGAATGGA 65095 | |||||| ||| Sbjct 74820 TGGTCTGAAGGGA 74832 Score = 96.9 bits (106), Expect = 5e-15 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| |||| ||| |||||||||||||| | || || || || || | || || | || Sbjct 107603 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCGTGCTGCCAGAA 107662 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 107663 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCCGCTGTTTCAGCAGCCAAAGTATCTA 107722 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||| || || || || ||| | |||| |||||||| || ||||| Sbjct 107723 GTTCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 107768 Score = 91.5 bits (100), Expect = 2e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115 || |||||||||||| |||||||| ||||||||||| || | || | || |||| | Sbjct 94555 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 94614 Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175 ||||| || |||||||| ||||| || | ||| || ||| | | || || ||||||| Sbjct 94615 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCA 94674 Query 66176 CGGTTCCAAGTATATGGC 66193 || |||| ||| || || Sbjct 94675 AGGCTCCAGGTAAATAGC 94692 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 65421 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 65480 || || || ||||| || | || | || || ||||| || || || || || || ||| Sbjct 88055 TAGGTTTCATATGGGCCATGCTCCCTGGCCAGATCACAGCTGGCTTCCAAAGCTCCATAA 88114 Query 65481 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 65540 ||||||||||| ||||| | |||||| | || || || | || ||||| ||||| Sbjct 88115 TAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATAC 88174 Query 65541 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 65600 | | |||||||| || ||||| | ||||| || ||||| || || || | ||| | Sbjct 88175 CTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGCGT 88234 Query 65601 TTATTAGA 65608 ||||| || Sbjct 88235 TTATTTGA 88242 >seq366 Length=2959005 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||| ||||| | |||||||||||||||||| || ||||| || || ||||| | Sbjct 58966 CCTCATCTCTGCTAATGAGTTCGTTGGAAAACGTGAGGCCAGGCATCAGTCCCCGCTTCT 59025 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| || || || ||||| || ||||||||||| || ||||| || || ||||| | Sbjct 59026 TGAGCCAGAAAATTGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACCGCAGCAAAAG 59085 Query 36300 CAATAAGTCTCTCTCC 36315 | | || | |||||| Sbjct 59086 CTACAACACGCTCTCC 59101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658162359733960