Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22]
1,269 sequences; 1,803,099,001 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq366 129 8e-25
seq981 123 3e-23
>seq366
Length=2959005
Score = 129 bits (142), Expect = 8e-25
Identities = 110/136 (81%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146
|||||||||| ||||| | |||||||||||||||||| || ||||| || || ||||| |
Sbjct 58966 CCTCATCTCTGCTAATGAGTTCGTTGGAAAACGTGAGGCCAGGCATCAGTCCCCGCTTCT 59025
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
| ||||| || || || ||||| || |||||||||||||| ||||| || || ||||| |
Sbjct 59026 TGAGCCAGAAAATTGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACCGCAGCAAAAG 59085
Query 42207 CAATAAGTCTCTCTCC 42222
| | || | ||||||
Sbjct 59086 CTACAACACGCTCTCC 59101
>seq981
Length=171841
Score = 123 bits (136), Expect = 3e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202
|| ||||||||||| ||||| ||||| |||||||| || || ||||| || ||||| |
Sbjct 76934 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTGTAAGGTTCAATG 76993
Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262
|||||||||||||||| ||| |||||||| || ||||| ||||| || || | | || |
Sbjct 76994 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAAGAAGTAAA 77053
Query 71263 CTATTTCTAAGACCAT 71278
|| ||||| | |||||
Sbjct 77054 CTGTTTCTTATACCAT 77069
Score = 107 bits (118), Expect = 3e-18
Identities = 141/193 (73%), Gaps = 3/193 (2%)
Strand=Plus/Plus
Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927
|||| ||||| || |||||||| || |||||| |||| |||| || || || || || |
Sbjct 74640 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 74699
Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987
||| ||||| ||||| || ||||| || || || || || ||||| || | | || |
Sbjct 74700 TCAAAGACTGGCTTTGGTCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACGGTTT 74759
Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGT-TTGTA 71046
| || | |||||||| | ||||||||||| | |||| | || || |||| | | |||
Sbjct 74760 TCTGAGAGATTTCCCATACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAATTTCTGGTA 74819
Query 71047 T--TCTGAATGGA 71057
| |||||| |||
Sbjct 74820 TGGTCTGAAGGGA 74832
Score = 96.9 bits (106), Expect = 5e-15
Identities = 121/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 72761 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820
|||| |||| ||| |||||||| ||||| | || || || || || | || || ||||
Sbjct 107603 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCGTGCTGCCAGAA 107662
Query 72821 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCA 72880
||||||| || || || | ||||| | || || ||| |||| || |||| ||| || |
Sbjct 107663 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCCGCTGTTTCAGCAGCCAAAGTATCTA 107722
Query 72881 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 72926
||| || || || || ||| | |||| |||||||| || |||||
Sbjct 107723 GTTCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 107768
Score = 89.7 bits (98), Expect = 7e-13
Identities = 117/162 (72%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 71409 GGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATT 71468
||| || ||||| || || || || |||||||||||||||||||| || || | ||||||
Sbjct 88081 GGCCAGATCACAGCTGGCTTCCAAAGCTCCATAATAAATGGTTTCAAAGATTTGCTTATT 88140
Query 71469 GAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAA 71528
| || || || || || ||||| ||||| | | |||||||| || ||||| |
Sbjct 88141 CAATAACTGGGCCTCTGGACTCTCAAAAGGATACCTCATCAGAATAAAAGCATCTGCCAG 88200
Query 71529 TCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGA 71570
||||| || ||||| || || || | || | ||||| ||
Sbjct 88201 ACCTTGTACCCCAATTCCAATGGGGCGATGGCGTTTATTTGA 88242
Score = 89.7 bits (98), Expect = 7e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081
||||||||||| |||||||| ||||||||||| || | || || || |||| | ||
Sbjct 94559 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGT 94618
Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141
|| || |||||||| ||||| || | ||| || ||| | | || || ||||||| ||
Sbjct 94619 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGC 94678
Query 72142 TCCAAGTATATGGC 72155
|||| ||| || ||
Sbjct 94679 TCCAGGTAAATAGC 94692
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671128554054440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |