Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq353 114 1e-20 >seq353 Length=3050693 Score = 114 bits (126), Expect = 1e-20 Identities = 107/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 13173 CTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTT 13232 |||||||||| || || || || || ||||| || || || |||||||| |||| ||| | Sbjct 2773739 CTTCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCT 2773798 Query 13233 TAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACG 13292 | | ||| ||||||||||||||||| ||||| || || | |||||| || || ||||| | Sbjct 2773799 TTAACCAGAATATAGCAGCAAACGATCCCGAGAAGAAAACTCCTTCTACAGCAGCAAAGG 2773858 Query 13293 CTATCAACCTTTCACC 13308 | | || |||||| || Sbjct 2773859 CCACCACCCTTTCCCC 2773874 Score = 84.2 bits (92), Expect = 2e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 12863 TGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCC 12922 ||||| || ||||| ||| ||||| || |||||||| |||||||| ||||| |||||| Sbjct 2768370 TGATACTCTGAAACTCGTTTCTCAAAGAAATTTGTTTTCCCTTCTAAAGAAATGTTTTCC 2768429 Query 12923 ATAAAATCGAAAGGATTTT 12941 |||||||| || ||||||| Sbjct 2768430 ATAAAATCAAAGGGATTTT 2768448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430975734453138