Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq213 131 2e-25 >seq213 Length=4306799 Score = 131 bits (144), Expect = 2e-25 Identities = 120/152 (79%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 128874 GGCTACCTCGGGTGCCAGGCACTCTCTGAGATGATACAGTTTTACTTGGAAGAGGTGATG 128933 || ||||| || |||||||| | || |||||||| ||||||||| |||||||||||||| Sbjct 3983595 GGTTACCTGGGCTGCCAGGCCTTGTCAGAGATGATCCAGTTTTACCTGGAAGAGGTGATG 3983536 Query 128934 CCGCAGGCGGAAAATCACGGGCCGGACATCAAAGAGCACGTTAACTCGCTGGGAGAAAAG 128993 || ||||| || | || || | | ||||||| |||||||| ||||||||||| || ||| Sbjct 3983535 CCCCAGGCTGAGAGCCAGGGCCAGAACATCAAGGAGCACGTGAACTCGCTGGGGGAGAAG 3983476 Query 128994 CTCAAAACGCTGCGTCTTCGACTGCGTCGCTG 129025 || || ||||| | || | || || ||||| Sbjct 3983475 CTGAAGACGCTCAGGCTGCAGCTCCGGCGCTG 3983444 Score = 82.4 bits (90), Expect = 7e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 129104 AGGCGTTTACAAGGCCATGAGCGAGTTCGACATATTCATCAACTACATAGAATCATACAT 129163 |||| | ||||| |||||||||||||| ||||| |||||||||||||||||| | ||||| Sbjct 3981381 AGGCATCTACAAAGCCATGAGCGAGTTTGACATTTTCATCAACTACATAGAAACCTACAT 3981322 Query 129164 GAC 129166 ||| Sbjct 3981321 GAC 3981319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447743297559280