Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq593 95.1 8e-15 >seq593 Length=7795800 Score = 95.1 bits (104), Expect = 8e-15 Identities = 119/162 (73%), Gaps = 1/162 (1%) Strand=Plus/Plus Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550 || ||||| | || || |||||||| ||||| || |||||||||||||||| ||||| Sbjct 5166959 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGC 5167018 Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610 || || | ||||||| | | ||||||||||| ||||| || || ||||| | | Sbjct 5167019 ACGCCTAGTCCCATGT-CTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCGCCATTCAC 5167077 Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTAT 25652 ||| || ||||| || | || | ||| ||||| || || || Sbjct 5167078 CACATAGAACTGGCAAAGGGCATGGCATGGAGGTAGGGCCAT 5167119 Score = 91.5 bits (100), Expect = 1e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832 ||| || |||| ||||| || |||| ||||||||| || || || || || |||| ||| Sbjct 5170248 CATATCTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAGTC 5170307 Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892 ||| |||| |||| || ||| ||||| || || | ||| ||||||||||| Sbjct 5170308 TCCTTCTTTTCTGTTAGAGAATCCCAGGCCATCCAGGAATTCACGGGACCCATTGGCGTC 5170367 Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 25940 |||||| || || ||||| || || ||||| | |||||||| || Sbjct 5170368 CCAGATTTTCACTCCCTTGGACGACAGTTCTTTAGCATTTGTGGATCC 5170415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340132339453137