Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq606 95.1 6e-15 seq896 93.3 2e-14 seq1015 84.2 1e-11 seq912 84.2 1e-11 >seq606 Length=1324913 Score = 95.1 bits (104), Expect = 6e-15 Identities = 77/93 (83%), Gaps = 1/93 (1%) Strand=Plus/Plus Query 11439 TTAATAAAAAATCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497 |||| |||||| ||| ||||||| | |||||||||| ||||||| |||||||||| Sbjct 261031 TTAAAAAAAAAGCAACCTTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAG 261090 Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530 ||| ||||||| |||||||||||||| ||||| Sbjct 261091 CACCACGCTCTAACCAACTGAGCTAACCGGCCG 261123 >seq896 Length=317993 Score = 93.3 bits (102), Expect = 2e-14 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 98589 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 98648 Query 11528 CCGTCGACGA 11537 ||| |||||| Sbjct 98649 CCGACGACGA 98658 Score = 84.2 bits (92), Expect = 1e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514 ||||||| | |||||||||| ||||||| ||||||||||||| ||||||| ||||| Sbjct 32470 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 32411 Query 11515 CTGAGCTAATGGGCC 11529 ||||||||| |||| Sbjct 32410 CTGAGCTAACCGGCC 32396 >seq1015 Length=5846585 Score = 84.2 bits (92), Expect = 1e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 888048 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 888107 Query 11528 CCGTCGACGA 11537 || || ||| Sbjct 888108 CCAGCGGCGA 888117 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 856127 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 856068 Query 11528 CC 11529 || Sbjct 856067 CC 856066 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| || Sbjct 858619 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 858560 Query 11528 CC 11529 || Sbjct 858559 CC 858558 >seq912 Length=283330 Score = 84.2 bits (92), Expect = 1e-11 Identities = 59/68 (87%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 |||||||| ||||||||||| ||||||| ||||||||||||| || |||| |||||| Sbjct 210915 TGGCCCATACGGGGATCGAACCTGCGACCTTGGCGTTATTAGCACCACACTCTAACCAAC 210856 Query 11516 TGAGCTAA 11523 |||||||| Sbjct 210855 TGAGCTAA 210848 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261487155793444