Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22]
1,269 sequences; 1,803,099,001 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq606 95.1 6e-15
seq896 93.3 2e-14
seq1015 84.2 1e-11
seq912 84.2 1e-11
>seq606
Length=1324913
Score = 95.1 bits (104), Expect = 6e-15
Identities = 77/93 (83%), Gaps = 1/93 (1%)
Strand=Plus/Plus
Query 11439 TTAATAAAAAATCAAA-TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAG 11497
|||| |||||| ||| ||||||| | |||||||||| ||||||| ||||||||||
Sbjct 261031 TTAAAAAAAAAGCAACCTTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAG 261090
Query 11498 CACGACGCTCTRACCAACTGAGCTAATGGGCCG 11530
||| ||||||| |||||||||||||| |||||
Sbjct 261091 CACCACGCTCTAACCAACTGAGCTAACCGGCCG 261123
>seq896
Length=317993
Score = 93.3 bits (102), Expect = 2e-14
Identities = 62/70 (89%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 98589 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 98648
Query 11528 CCGTCGACGA 11537
||| ||||||
Sbjct 98649 CCGACGACGA 98658
Score = 84.2 bits (92), Expect = 1e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||||| | |||||||||| ||||||| ||||||||||||| ||||||| |||||
Sbjct 32470 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 32411
Query 11515 CTGAGCTAATGGGCC 11529
||||||||| ||||
Sbjct 32410 CTGAGCTAACCGGCC 32396
>seq1015
Length=5846585
Score = 84.2 bits (92), Expect = 1e-11
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 888048 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 888107
Query 11528 CCGTCGACGA 11537
|| || |||
Sbjct 888108 CCAGCGGCGA 888117
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 856127 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 856068
Query 11528 CC 11529
||
Sbjct 856067 CC 856066
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 858619 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 858560
Query 11528 CC 11529
||
Sbjct 858559 CC 858558
>seq912
Length=283330
Score = 84.2 bits (92), Expect = 1e-11
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
|||||||| ||||||||||| ||||||| ||||||||||||| || |||| ||||||
Sbjct 210915 TGGCCCATACGGGGATCGAACCTGCGACCTTGGCGTTATTAGCACCACACTCTAACCAAC 210856
Query 11516 TGAGCTAA 11523
||||||||
Sbjct 210855 TGAGCTAA 210848
Lambda K H
0.638 0.410 0.920
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261487155793444
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |