Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq1215 161 1e-34 seq582 114 2e-20 >seq1215 Length=5034626 Score = 161 bits (178), Expect = 1e-34 Identities = 218/304 (72%), Gaps = 0/304 (0%) Strand=Plus/Minus Query 8673 GAACTCGGAACGCGGCCAACGGACACCCTTTGACGTTGCTACAGACTAGAGACTGGATAG 8732 |||| | ||||| || | || || ||||| ||||| | |||| |||||||| || | Sbjct 1835069 GAACACTGAACGAGGTGGAGGGGCAGCCTTTCACGTTATTGCAGATGAGAGACTGAATGG 1835010 Query 8733 TTGCACTCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAAC 8792 ||| | |||| ||| ||| ||||| ||||| || || |||||||| |||||||| Sbjct 1835009 AGGCAGTGTTGATGATTTTAAAACCCACTTCTCCACCAAAAGTGCTGGGCTTCCAGTAGT 1834950 Query 8793 CCGGGGAGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGA 8852 || || || ||| ||| |||| || ||||| | || || ||||| || || || | Sbjct 1834949 GAGGAGAACATATGGGGTTGCCCATCAGTCCTTTCAAAGAGAAAGGAGCTCCGAGTTCTA 1834890 Query 8853 GAATGCTCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACA 8912 ||| ||||||| |||||||| | ||| || ||||||||||||| | | | ||||| Sbjct 1834889 CCATGGTCTCACCAAAGATGGCATCGGGGCGAGGCTTTTCCACCAGAAGGGCAGGGTACA 1834830 Query 8913 ACTCCACAGCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTC 8972 ||||| || || ||||| || || || || | || ||||| |||||||| |||| Sbjct 1834829 GCTCCATGGCGTCAATGTCACCATAGAGTGCTTCTAACTCCGCAGCCATTTCCTTCTCTC 1834770 Query 8973 CTGT 8976 |||| Sbjct 1834769 CTGT 1834766 Score = 156 bits (172), Expect = 6e-33 Identities = 170/226 (75%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 9632 TGGTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCACA 9691 ||||||| || || | || ||| ||| ||||| || || | || || || ||||||| Sbjct 1833513 TGGTCTGGAAGAGCCGCTCATCATCCCACTCTGGGTGCTCCTGCTTAAGCACGTCGCACA 1833454 Query 9692 CTCTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCAA 9751 ||||||||||||| | |||||||| || ||||||||||||||||||||||||||||| | Sbjct 1833453 CTCTGTTGTGTTCTCGCAGCCAGATCGTGGCGTACATCATGAGACCAGGCACCAGGCCGA 1833394 Query 9752 AAGCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATGT 9811 | |||| || || ||||| | |||| | || || || | || || |||||||| | Sbjct 1833393 ACACCTCCTGGCCCACAGCAAACCGCAGGTGCTCAGGGACGTGAGGCGGGTAGATCATCT 1833334 Query 9812 GCACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAAT 9857 |||||| || |||| | ||||||||||| || || ||||| Sbjct 1833333 CCACCTGAGTGTCCCTGACTGTGGGGGGATACACCTCTCCATCAAT 1833288 Score = 116 bits (128), Expect = 5e-21 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 10028 TCTTACCCCATGTCCCAGTCCTTTAGTGAAGGCCGGGCCTCGCGCCAAATCAGTCCTAAA 10087 |||||||||||| ||||||||||||||||| || || |||||| ||| ||| | || Sbjct 1832430 TCTTACCCCATGGCCCAGTCCTTTAGTGAAAGCTGGTCCTCGCTTATGATCTGTCTTGAA 1832371 Query 10088 AAACTGGTGCGTGAAATGTTGGCCAAAAAAGGCAAACATTAAGTTGGTGCCCTGGGGATC 10147 ||||| || ||||| || ||| |||| ||||||||||| || || ||||||||||| || Sbjct 1832370 GAACTGATGGGTGAAGTGCTGGGCAAAGAAGGCAAACATCAAATTTGTGCCCTGGGGGTC 1832311 Query 10148 GGGA 10151 ||| Sbjct 1832310 AGGA 1832307 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 10287 TCACCTTTGACCCCAAGAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 10346 |||||||| || || | |||||||| || || | || || ||||| |||| || | | Sbjct 1831935 TCACCTTTCACACCCATGGGAGTTGGGCAGTCATCAGCCACAGGAGGAAGAACTCTGGTG 1831876 Query 10347 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATG 10406 ||||||||||| || || || | |||||||||| || | |||| || ||||| | Sbjct 1831875 TAATAGGAGAGGTTAGAAAAGGATTCCCAGCTTTTATAGCCATAGTGTGCATTGTAAGTC 1831816 Query 10407 GGAGGGCTGTCAATCAAATCGGATCTACCTGAA 10439 || |||||||||| ||||| ||||| ||||| Sbjct 1831815 GGTGGGCTGTCAACCAAATGTGATCTGGCTGAA 1831783 Score = 84.2 bits (92), Expect = 3e-11 Identities = 202/300 (67%), Gaps = 8/300 (3%) Strand=Plus/Minus Query 9322 CTTACTCGGCCAGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGGGTC 9381 || || | |||||| || || || |||| ||||| || | |||||||| ||||| | Sbjct 1834108 CTCACCCTGCCAGCAATCTGCTTGCTGAATGATTCCACAAACTGGGTAAGCCCGTGTTCC 1834049 Query 9382 ATGAGTATGGAATTGTTGTAAACGAAGTTAATGTAGTCATACTTTGTTTTATCAATCTCA 9441 || |||| || |||||||| ||||| | ||| |||| | ||| || | Sbjct 1834048 ATCAGTAAAGAGTTGTTGTAGACGAACTGCGGATAGCTGTACTCCTGGTCATCGATGTGG 1833989 Query 9442 AACGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACGA 9501 || | ||||||| || | ||||||||| || | | |||||||| | | || || Sbjct 1833988 AAGGTGTCCGGCAGAAGGGGATGCCAGTGGTAGAGGGTATTAAACTCAGCAGCAATGCGG 1833929 Query 9502 TTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAACTGAAAGTG 9560 |||||||||||||| | | ||| ||||| || || | |||| || | ||||| Sbjct 1833928 TTTTGGTACTGGAATTGTTGGTTGAAA-AGCAGCTCTGGGTCAAACTTCAGTTTGAAGTG 1833870 Query 9561 GTAGCCGCTGAGCTGCTGAACATA--CTGCG-TCACGATAATGTTGATTGTTTCCCCGAT 9617 ||||| || | ||||| ||||| || || |||| ||| || || ||||| || || Sbjct 1833869 ATAGCCACTCAAGTGCTGTACATAGTCTTCGATCAC---AATCTTAATAGTTTCTCCTAT 1833813 >seq582 Length=7864270 Score = 114 bits (126), Expect = 2e-20 Identities = 167/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 8739 TCTTGACGATCCCAAACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGG 8798 |||||||||| || |||| || || || || ||||| | |||||||| | || | Sbjct 3197750 TCTTGACGATGTTGAAGCCCATCTCACCACCAAACGTGCTCGCCTTCCAGTACTCTGGAG 3197691 Query 8799 AGCAGATGACGTTCGCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGC 8858 | |||||| | ||| | | |||||| ||||||||||| |||||||| | || | || | Sbjct 3197690 AACAGATGGCATTCCCTAAGAGGCCCTTGAGGGAAAAGGGAGCCCCAATTTCTATCATAC 3197631 Query 8859 TCTCACCGAAGATGGCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCA 8918 |||| || ||||||| | | ||| || ||| || | | | ||| | ||| ||||||| Sbjct 3197630 TCTCCCCAAAGATGGAGCTTGGATGGCACTTCTCAAGAAGCAGTCCCGGGTAGAACTCCA 3197571 Query 8919 CAGCCTCGATGTCTCCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCT 8974 || || |||||||| || || || | || || || || ||||| |||||| Sbjct 3197570 AGGCATCAATGTCTCCATATAGCTCCTCCAACTCAGCCGCCATCTCCTTCTCTCCT 3197515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708513561025360