Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq366 129 7e-25 seq981 125 9e-24 seq353 102 1e-16 >seq366 Length=2959005 Score = 129 bits (142), Expect = 7e-25 Identities = 110/136 (81%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| ||||| ||||| |||||||||||||||||||| || ||||| || || ||||| | Sbjct 58966 CCTCATCTCTGCTAATGAGTTCGTTGGAAAACGTGAGGCCAGGCATCAGTCCCCGCTTCT 59025 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | ||||| || || || || || || |||||||||||||| ||||| || |||||||| | Sbjct 59026 TGAGCCAGAAAATTGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACCGCAGCAAAAG 59085 Query 33446 CAATAAGTCTCTCTCC 33461 | | || | |||||| Sbjct 59086 CTACAACACGCTCTCC 59101 >seq981 Length=171841 Score = 125 bits (138), Expect = 9e-24 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 62337 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62396 || ||||||||||| ||||| ||||| |||||||| || || ||||| || ||||| | Sbjct 76934 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTGTAAGGTTCAATG 76993 Query 62397 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62456 |||||||||||||||| ||| |||||||| || ||||| ||||| || || | | |||| Sbjct 76994 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAAGAAGTAAA 77053 Query 62457 CTATTTCTAAGACCGTA 62473 || ||||| | ||| || Sbjct 77054 CTGTTTCTTATACCATA 77070 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 62062 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62121 |||| ||||| || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 74640 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 74699 Query 62122 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62181 ||| ||| || ||||| || ||||| || || || || || ||||| || | | || | Sbjct 74700 TCAAAGACTGGCTTTGGTCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACGGTTT 74759 Query 62182 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGT-TTGTA 62240 | || | |||||||| | ||||||||||| | |||| | || || |||| | | ||| Sbjct 74760 TCTGAGAGATTTCCCATACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAATTTCTGGTA 74819 Query 62241 T--TCTGAATGGA 62251 | |||||| ||| Sbjct 74820 TGGTCTGAAGGGA 74832 Score = 96.9 bits (106), Expect = 4e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 63212 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63271 || |||||||||||| |||||||| ||||||||||| || | || || || |||| | Sbjct 94555 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 94614 Query 63272 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63331 ||||| || |||||||| ||||| || | ||| || ||| | | || || ||||||| Sbjct 94615 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCA 94674 Query 63332 CGGTTCCAAGTATATGGC 63349 || |||| ||| || || Sbjct 94675 AGGCTCCAGGTAAATAGC 94692 Score = 93.3 bits (102), Expect = 5e-14 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 63955 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 64014 |||| |||| ||| |||||||| ||||| | || || || || || | || || |||| Sbjct 107603 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCGTGCTGCCAGAA 107662 Query 64015 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 64074 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 107663 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCCGCTGTTTCAGCAGCCAAAGTATCTA 107722 Query 64075 ATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCAT 64120 ||| || || || || ||| | |||| ||||| || || ||||| Sbjct 107723 GTTCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 107768 Score = 82.4 bits (90), Expect = 1e-10 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 62577 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 62636 || || || ||||| || | || | || || ||||| || || || || || || ||| Sbjct 88055 TAGGTTTCATATGGGCCATGCTCCCTGGCCAGATCACAGCTGGCTTCCAAAGCTCCATAA 88114 Query 62637 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAA 62696 ||||||||||| ||||| | |||||| | || || || | || ||||| ||||| Sbjct 88115 TAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATAC 88174 Query 62697 TTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62756 | | |||||||| || || || | ||||| || ||||| || || || | ||| | Sbjct 88175 CTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGCGT 88234 Query 62757 TTATTAGA 62764 ||||| || Sbjct 88235 TTATTTGA 88242 >seq353 Length=3050693 Score = 102 bits (112), Expect = 1e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 33328 TCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 33387 || ||||| || || ||||| |||||||| |||||||| ||||| || || | || || Sbjct 2773741 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCTTT 2773800 Query 33388 AGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33446 | ||| ||||| | ||| || ||||| || ||||| | ||||||||| ||||||||||| Sbjct 2773801 AACCAGAATATAGCAGCAAACGATCCCGAGAAGAAAACTCCTTCTACAGCAGCAAAGGC 2773859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622937318500040