Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq981 93.3 1e-13 seq366 91.5 4e-13 >seq981 Length=171841 Score = 93.3 bits (102), Expect = 1e-13 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 364118 AGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACA 364177 |||| |||| |||||| || || || |||| |||||||| || || || ||| | |||| Sbjct 93362 AGCTTTGGTATGCCATTATTGAGTCTCAGACAGAGACAGGTACCCCGTACATGCTTTACA 93303 Query 364178 AAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACC 364237 ||||||| || || || ||| |||||||||| |||| || || || | ||||||| Sbjct 93302 AAGATTCCTGTAATCGGAAGAGCAACCAGCAGAACCTGGGAACGATCAAATGTAGCAACC 93243 Query 364238 TATGTACCGAGATTATTGAATACACC 364263 | || || || || | ||||| ||| Sbjct 93242 TGTGCACAGAAATAGTAGAATATACC 93217 Score = 91.5 bits (100), Expect = 4e-13 Identities = 119/165 (72%), Gaps = 5/165 (3%) Strand=Plus/Minus Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897 ||||| |||||||| || || |||||| ||| || || |||||||||||||| | Sbjct 94701 GGGGCATTTGCTATTTACCTGGAGCCTTGGCATTTAGACATCTTTGAGTTTCTTGATTTA 94642 Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957 ||| ||||| ||||| || ||| |||||| | || || |||| ||| |||||| || Sbjct 94641 AAGAAGAACACAGGAAAGGAAGAACAGCGTGCCAGGGACCTTTTCTTTGCCCTTTGGATT 94582 Query 363958 TCTGACCATTTTATGAAGCGCGTGGAG-----GCAGGTAAGAATT 363997 | || | || ||||| || |||||| ||||| |||||| Sbjct 94581 CCAGATCTCTTCATGAAACGAGTGGAGACTAATCAGGTGAGAATT 94537 >seq366 Length=2959005 Score = 91.5 bits (100), Expect = 4e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCA 22548 || ||| || | || ||||||| ||| |||||||| ||||||||||| | ||| || Sbjct 59098 GAGCGTGTTGTAGCTTTTGCTGCGGTGGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCA 59039 Query 22549 ATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATT 22608 || || ||||| || || || | | | ||||| || || |||||||| || || | ||| Sbjct 59038 ATTTTCTGGCTCAAGAAGCGGGGACTGATGCCTGGCCTCACGTTTTCCAACGAACTCATT 58979 Query 22609 AGCCGAGATGAGG 22621 ||| ||||||||| Sbjct 58978 AGCAGAGATGAGG 58966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303332408692358