Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq981 125 9e-24 seq366 120 4e-22 >seq981 Length=171841 Score = 125 bits (138), Expect = 9e-24 Identities = 110/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 62192 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 62251 || ||||||||||| ||||| ||||| |||||||| || || ||||| || ||||| | Sbjct 76934 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTGTAAGGTTCAATG 76993 Query 62252 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62311 |||||||||||||||| ||| |||||||| || ||||| ||||| || || | | |||| Sbjct 76994 GACTCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAAGAAGTAAA 77053 Query 62312 CTATTTCTAAGACCGTA 62328 || ||||| | ||| || Sbjct 77054 CTGTTTCTTATACCATA 77070 Score = 113 bits (124), Expect = 6e-20 Identities = 142/193 (74%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 61917 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 61976 |||| ||||| || |||||||| || |||||| ||| | || || || |||||||| | Sbjct 74640 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 74699 Query 61977 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCT 62036 ||| ||| || ||||| || ||||| || || || || || ||||| || | || || | Sbjct 74700 TCAAAGACTGGCTTTGGTCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACGGTTT 74759 Query 62037 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGT-TTGTA 62095 | || | |||||||| | ||||||||||| | |||| | || || |||| | | ||| Sbjct 74760 TCTGAGAGATTTCCCATACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAATTTCTGGTA 74819 Query 62096 T--TCTGAATGGA 62106 | |||||| ||| Sbjct 74820 TGGTCTGAAGGGA 74832 Score = 102 bits (112), Expect = 1e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 63810 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 63869 |||| |||| ||| |||||||||||||| | || || || || || | || || |||| Sbjct 107603 CACTGAATACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACAGCAATCCGTGCTGCCAGAA 107662 Query 63870 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 63929 ||||||| || || || | ||||| | || || ||| |||| || |||| ||| || | Sbjct 107663 TGGCATAGTCAGGGTGCTTAGTAGTCAAGGTTGCCGCTGTTTCAGCAGCCAAAGTATCTA 107722 Query 63930 ATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 ||| || || || || ||| | |||| |||||||| || ||||| Sbjct 107723 GTTCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 107768 Score = 96.9 bits (106), Expect = 4e-15 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 63067 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 63126 || |||||||||||| |||||||| ||||||||||| || | || || || |||| | Sbjct 94555 CTCCACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACG 94614 Query 63127 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63186 ||||| || |||||||| ||||| || | ||| || ||| | | || || ||||||| Sbjct 94615 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCA 94674 Query 63187 CGGTTCCAAGTATATGGC 63204 || |||| ||| || || Sbjct 94675 AGGCTCCAGGTAAATAGC 94692 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 62432 TATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAA 62491 || || || ||||| || | || | || || ||||| || || || || || || ||| Sbjct 88055 TAGGTTTCATATGGGCCATGCTCCCTGGCCAGATCACAGCTGGCTTCCAAAGCTCCATAA 88114 Query 62492 TAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAA 62551 ||||||||||| ||||| | |||||| | || || || | || ||||| ||||| Sbjct 88115 TAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATAC 88174 Query 62552 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 62611 | | |||||||| || ||||| | ||||| || ||||| || || || | ||| | Sbjct 88175 CTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGCGT 88234 Query 62612 TTATTAGA 62619 ||||| || Sbjct 88235 TTATTTGA 88242 >seq366 Length=2959005 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 |||| ||||| ||||| | |||||||||||||||||| || ||||| || || ||||| | Sbjct 58966 CCTCATCTCTGCTAATGAGTTCGTTGGAAAACGTGAGGCCAGGCATCAGTCCCCGCTTCT 59025 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 | ||||| || || || ||||| || ||||||||||| || ||||| || || ||||| | Sbjct 59026 TGAGCCAGAAAATTGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACCGCAGCAAAAG 59085 Query 32803 CAATAAGTCTCTCTCC 32818 | | || | |||||| Sbjct 59086 CTACAACACGCTCTCC 59101 Score = 100 bits (110), Expect = 4e-16 Identities = 85/105 (81%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980 |||||||| || || ||||| | ||||| |||||||| ||||| |||||||| ||||| Sbjct 60344 ATCTTTAATGTAGGTGTCAATGAGGAGACTGTACATTTCAGAATGTATGTTTTCCATGGC 60403 Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTC 33025 ||||| || ||||||||||| | |||||||| ||||| || || Sbjct 60404 AATTTGGAAGCCGTAGAAGCAGCGGGCCTCGGTGATCTGAACCTC 60448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633621949012400