Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq366 89.7 1e-12 seq353 84.2 4e-11 >seq366 Length=2959005 Score = 89.7 bits (98), Expect = 1e-12 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 42708 GTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGG 42767 ||||| ||| | || || || ||||||||||| || || | || || || || |||||| Sbjct 59089 GTAGCTTTTGCTGCGGTGGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCAATTTTCTGG 59030 Query 42768 CTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGAC 42827 |||||| || || |||||| || ||||| || || ||||||||||| ||||| || Sbjct 59029 CTCAAGAAGCGGGGACTGATGCCTGGCCTCACGTTTTCCAACGAACTCATTAGCAGAGAT 58970 Query 42828 GAGG 42831 |||| Sbjct 58969 GAGG 58966 >seq353 Length=3050693 Score = 84.2 bits (92), Expect = 4e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || || ||| |||| |||||| | || || || || | ||||||||||| | || || Sbjct 2773874 GGGGAAAGGGTGGTGGCCTTTGCTGCTGTAGAAGGAGTTTTCTTCTCGGGATCGTTTGCT 2773815 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 | || |||||| | ||| | | |||| | ||||| ||||||||||| || || ||||| Sbjct 2773814 GCTATATTCTGGTTAAAGAAAAGAGGTCTT-ATGCCTGGACTCACCTTTTCCAATGAACT 2773756 Query 42815 CATCAGCAGGGACGA 42829 ||||||||| || || Sbjct 2773755 CATCAGCAGAGATGA 2773741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944324220419440