Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq1215 158 2e-33 seq582 105 1e-17 >seq1215 Length=5034626 Score = 158 bits (174), Expect = 2e-33 Identities = 177/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 9726 GATTAGACGAGTGGTTTGAAACAACTGCTCGTCACCCCATTCCGGGTGTTCGTGTTTGAG 9785 |||||| | |||| || || | | |||| ||| |||| || ||||| || || || || Sbjct 1833524 GATTAGCCTGCTGGTCTGGAAGAGCCGCTCATCATCCCACTCTGGGTGCTCCTGCTTAAG 1833465 Query 9786 AACATCGCAGACCCTGTTGTGTTCTCTCAGCCATATGGTGGCGTACATCATTAAACCCGG 9845 || ||||| || ||||||||||||| |||||| || |||||||||||||| | ||| || Sbjct 1833464 CACGTCGCACACTCTGTTGTGTTCTCGCAGCCAGATCGTGGCGTACATCATGAGACCAGG 1833405 Query 9846 CACTAAACCAAACACTTCATTCCCCACTGCAAAGCGCAGATCATCGGGCACTTCGGGCGC 9905 ||| | || ||||| || | ||||| ||||| ||||| | || || || | |||| Sbjct 1833404 CACCAGGCCGAACACCTCCTGGCCCACAGCAAACCGCAGGTGCTCAGGGACGTGAGGCGG 1833345 Query 9906 ATACAGCATATGCACCTGGGTCTCTTTGACGGTGGGGGGATACATTTCACCGTCAAT 9962 || | ||| | |||||| || || |||| ||||||||||||| || || ||||| Sbjct 1833344 GTAGATCATCTCCACCTGAGTGTCCCTGACTGTGGGGGGATACACCTCTCCATCAAT 1833288 Score = 118 bits (130), Expect = 2e-21 Identities = 199/286 (70%), Gaps = 4/286 (1%) Strand=Plus/Minus Query 9436 CCGGCAATCTGTCTAGTGAACGATTCAACTAATTGGGCTATTCCGTGCTTGATGAGGATG 9495 || |||||||| | |||| ||||| || || |||| | ||||| | || || | Sbjct 1834099 CCAGCAATCTGCTTGCTGAATGATTCCACAAACTGGGTAAGCCCGTGTTCCATCAGTAAA 1834040 Query 9496 GAATTGTTGTAAACGAAGTGTTCGTAACCATACTTCGCGTCGCCTATGCGAAAATCATCA 9555 || |||||||| ||||| || || | |||| | ||| | ||| | || || Sbjct 1834039 GAGTTGTTGTAGACGAACTGCGGATAGCTGTACTCCTGGTCATCGATGTGGAAGGTGTCC 1833980 Query 9556 GGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGGTAC 9615 |||| || | ||||||| ||||||||||||| ||||| || || || ||||| |||||| Sbjct 1833979 GGCAGAAGGGGATGCCAGTGGTAGAGGGTATTAAACTCAGCAGCAATGCGGTTTTGGTAC 1833920 Query 9616 TGAAA--GGCGGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACCCGC 9673 || || | ||| ||| || | ||| |||||||| | || | |||||| || || | Sbjct 1833919 TGGAATTGTTGGT--TGAAAAGCAGCTCTGGGTCAAACTTCAGTTTGAAGTGATAGCCAC 1833862 Query 9674 TGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719 | | ||||| ||||| | | ||| | ||| ||||| ||||| || Sbjct 1833861 TCAAGTGCTGTACATAGTCTTCGATCACAATCTTAATAGTTTCTCC 1833816 Score = 100 bits (110), Expect = 4e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 10387 TCACCTTTCACCCCGAGAGGAGTAGGGCAGTCACGAGGAACCGGAGGCAGAGTTCTCGTA 10446 ||||||||||| || | ||||| ||||||||| || || ||||| ||| ||| || Sbjct 1831935 TCACCTTTCACACCCATGGGAGTTGGGCAGTCATCAGCCACAGGAGGAAGAACTCTGGTG 1831876 Query 10447 TAATAGGATAGATTCGAAAATGCTTCCCAGCTATTGTAGCCATAATCTAAGTTGTAGAGC 10506 |||||||| || || ||||| | ||||||||| || |||||||| | | ||||| | Sbjct 1831875 TAATAGGAGAGGTTAGAAAAGGATTCCCAGCTTTTATAGCCATAGTGTGCATTGTAAGTC 1831816 Query 10507 GGGGGACTGTCAATCATCTCGGACCTGGCT 10536 || || ||||||| || | || |||||| Sbjct 1831815 GGTGGGCTGTCAACCAAATGTGATCTGGCT 1831786 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 10115 GTTCGCTCTTACCCCATGCCCCAATCCTGTCGTGAAAGCCGGTCCTCGCACCATATCGGT 10174 |||| |||||||||||| |||| |||| | |||||||| ||||||||| ||| || Sbjct 1832436 GTTCTGTCTTACCCCATGGCCCAGTCCTTTAGTGAAAGCTGGTCCTCGCTTATGATCTGT 1832377 Query 10175 CCTAAAAAATTGGTGTGTAAAGTGTTGCCCGAAAAAAGCGAACATCAGGTTGGTGCCCTG 10234 | | || || || || || ||||| || | || || || ||||||| || |||||||| Sbjct 1832376 CTTGAAGAACTGATGGGTGAAGTGCTGGGCAAAGAAGGCAAACATCAAATTTGTGCCCTG 1832317 Query 10235 GGGATCGGGGATAAA 10249 ||| || || ||||| Sbjct 1832316 GGGGTCAGGAATAAA 1832302 >seq582 Length=7864270 Score = 105 bits (116), Expect = 1e-17 Identities = 172/245 (70%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 8933 GTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTTCCAGTAC 8992 || || || || ||||||| || || | || || || || ||||| | ||||||||| Sbjct 3197757 GTGGCTGTCTTGACGATGTTGAAGCCCATCTCACCACCAAACGTGCTCGCCTTCCAGTAC 3197698 Query 8993 GCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCCCAGCTCG 9052 | || || |||||| | ||| | | ||| || || | |||||| |||||||| | || Sbjct 3197697 TCTGGAGAACAGATGGCATTCCCTAAGAGGCCCTTGAGGGAAAAGGGAGCCCCAATTTCT 3197638 Query 9053 ATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAG-CCAGTGTA 9111 || || ||||| || ||||||| | ||| | || || | || | || || | ||| Sbjct 3197637 ATCATACTCTCCCCAAAGATGGAGCTTGGATGGCACTTCTCAA-GAAGCAGTCCCGGGTA 3197579 Query 9112 GAGTTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTCCTTCTC 9171 || || | || || | ||| ||||| || | |||||||| || || ||||||||||| Sbjct 3197578 GAACTCCAAGGCATCAATGTCTCCATATAGCTCCTCCAACTCAGCCGCCATCTCCTTCTC 3197519 Query 9172 ACCTA 9176 |||| Sbjct 3197518 TCCTA 3197514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723716519864600