Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq353 116 4e-21 seq366 98.7 1e-15 seq981 93.3 5e-14 >seq353 Length=3050693 Score = 116 bits (128), Expect = 4e-21 Identities = 106/134 (79%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 18985 TCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttttt 19044 || ||||| || || | |||||| ||||| || | |||||||| || |||||||| ||| Sbjct 2773741 TCATCTCTGCTGATGAGTTCATTGGAAAAGGTGAGTCCAGGCATAAGACCTCTTTTCTTT 2773800 Query 19045 AACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCA 19104 ||||||||||||| |||||| ||||| || ||||| | |||||||| || ||||| || Sbjct 2773801 AACCAGAATATAGCAGCAAACGATCCCGAGAAGAAAACTCCTTCTACAGCAGCAAAGGCC 2773860 Query 19105 ACTAGTCTTTCTCC 19118 || | ||||| || Sbjct 2773861 ACCACCCTTTCCCC 2773874 >seq366 Length=2959005 Score = 98.7 bits (108), Expect = 1e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||| ||||| || || | ||| || ||||| || | |||||||||||||| | || | Sbjct 58966 CCTCATCTCTGCTAATGAGTTCGTTGGAAAACGTGAGGCCAGGCATCAGTCCCCGCTTCT 59025 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | | |||||| || || ||||| || ||||||||||| || ||||| || || ||||||| Sbjct 59026 TGAGCCAGAAAATTGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACCGCAGCAAAAG 59085 Query 19103 CAAC 19106 | || Sbjct 59086 CTAC 59089 >seq981 Length=171841 Score = 93.3 bits (102), Expect = 5e-14 Identities = 122/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 47050 TCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGGTTCTGAAATATGAATAT 47109 |||| || ||||| ||||||||||| | ||| ||| |||| || | |||||| || | Sbjct 74640 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGGATGT 74699 Query 47110 TAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCC 47169 | | ||| || || || ||||| || |||||||| || |||||||| | | || Sbjct 74700 TCAAAGACTGGCTTTGGTCAATGAAAGCACCTCTCTCGGCTGCCATCTTGAGAACGGTTT 74759 Query 47170 TTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTCTTCTGG 47218 | || | || |||||||| |||||||||| ||| || | ||| || || Sbjct 74760 TCTGAGAGATTTCCCATACAGTTTTATAAAGTTGCTTCAGGTCATCAGG 74808 Score = 93.3 bits (102), Expect = 5e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 47328 TGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGAT 47387 ||||||||||| || | ||||| || | || || || || || || ||||| || || Sbjct 76937 TGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTGCTGGTGTAAGGTTCAATGGAC 76996 Query 47388 TCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCTA 47447 ||||||||||| | ||| |||||||| || || |||||||| | |||| | ||| || Sbjct 76997 TCATTATTTCCCAGAATCTGAGCAGTGGAAGCAGTAGGCATTGGGGCAAGAAGTAAACTG 77056 Query 47448 TTTCTTACTCCATA 47461 ||||||| ||||| Sbjct 77057 TTTCTTATACCATA 77070 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 48600 GTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTA 48659 || || | ||| || | || ||||| ||||| ||||||| |||| || | | || Sbjct 102474 GTACCAGCATTGAAGAGAGTGGGAGAGGCATGGGTAAACCACCTCTCAGAAAGAAGGTTG 102533 Query 48660 TATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAAC 48719 |||||||||||| ||| ||||||||| || || || || | |||||| | ||| ||| Sbjct 102534 TATGTTTCAATAGCAGCATCTATATCTTCTTTGTGAATCCCCACAGATACCCTCATCAAC 102593 Query 48720 ATATATTGAGGTCTTTCA 48737 |||| ||| ||||||||| Sbjct 102594 ATATGTTGTGGTCTTTCA 102611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562099883549160