Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq593 136 3e-27 seq958 100 2e-16 >seq593 Length=7795800 Score = 136 bits (150), Expect = 3e-27 Identities = 128/163 (79%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928 || ||||||| ||| || |||||||| ||||| || ||||||||||||||||| ||||| Sbjct 5166959 AGGCCGGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGC 5167018 Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988 || || || |||||||| | ||||||||||| ||||| || || ||||| || | | Sbjct 5167019 ACGCCTAGTCCCATGTCTGCTGACCTCTGGTACAGCTGGCAGGACAGCTCGCCATTCACC 5167078 Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCATGA 30031 || || ||||| || | || ||||| ||||| || ||||||| Sbjct 5167079 ACATAGAACTGGCAAAGGGCATGGCATGGAGGTAGGGCCATGA 5167121 Score = 87.8 bits (96), Expect = 1e-12 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209 ||| || |||| ||||| || |||||||||||||| || || || || || || | ||| Sbjct 5170248 CATATCTTTGTATTCTGCCCCAAAATGCCTCCACTGAAAGCCATAAACTGGGCCTAAGTC 5170307 Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269 ||| |||| |||| ||| ||| |||| || || | ||| || |||||||| Sbjct 5170308 TCCTTCTTTTCTGTTAGAGAATCCCAGGCCATCCAGGAATTCACGGGACCCATTGGCGTC 5170367 Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCC 30317 |||||| || || ||||| || || ||||| | |||||||| || Sbjct 5170368 CCAGATTTTCACTCCCTTGGACGACAGTTCTTTAGCATTTGTGGATCC 5170415 >seq958 Length=204405 Score = 100 bits (110), Expect = 2e-16 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 112102 TTAAGCTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 112161 || || || || ||||| |||| || |||||||| | | ||||| |||||| ||||| Sbjct 170552 TTGAGTTCTCTACTGAGAACTAAATTAATCCTGTCCTTTAAAGGTCGATTCTTCTCGGGA 170493 Query 112162 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209 ||||||||||| ||||| |||||||| ||||||| |||||||| ||| Sbjct 170492 ATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATTCTGCTTACCT 170445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408611280345737