Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq633 89.7 4e-13 >seq633 Length=1155427 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||| ||||| || | | |||||| || || ||| |||||| ||||||||||| || || Sbjct 85038 GCCACCCCTCAGAGGAAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGA 84979 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| | || | || || | ||| || || ||||| ||||| ||||| || || | || Sbjct 84978 GAGAGTGCGGCCATCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGG 84919 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 |||||||||||| || ||| | | ||| | | || || | ||| || Sbjct 84918 GGTGCCCTCCTTGTCTTGGATTTTTGCTCTGACATTCTCAATAGTGTCACTGGGCTCAAC 84859 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||| | || || || || || |||| || || ||||| ||||||||| Sbjct 84858 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCATC 84810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380931708442887