Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_020474.2 Length=180421 Score E Sequences producing significant alignments: (Bits) Value seq1048 325 5e-84 seq382 147 3e-30 seq893 105 8e-18 >seq1048 Length=13607314 Score = 325 bits (360), Expect = 5e-84 Identities = 667/985 (68%), Gaps = 11/985 (1%) Strand=Plus/Plus Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111 ||||| || |||||||| |||| ||| || | ||||| ||| |||| || || || || Sbjct 12151846 CAGATACTCATCCAGACACTGGATGGCAAAGAGGTCAATGTCCACGTCAAACTTGTTGGC 12151905 Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171 |||| ||||| || | || ||||||| || ||| || | || || || || || Sbjct 12151906 AAACAAGTGGTGC---TTGCGCAGTATCCAGTTCAAGTCACCTGCTCCAAAAACACACAC 12151962 Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231 ||| || | ||| || || ||||| || || || |||| || || | ||||||||| Sbjct 12151963 GGAGCGCACGTGGACACCATTGCAGGGTGGATAGGGAGCACCCTTGTAAATGTCACCTTC 12152022 Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291 |||||||||| || |||||||| || || || ||||||||||| |||||| || | Sbjct 12152023 AAAGTACTGCCATTTGACAAACCTAGCAATTGCATGCATGTCGGACATGTCGTCCTTTTG 12152082 Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351 | | || | | || || || | || || | ||| | |||||||| || | ||| Sbjct 12152083 GCTTAAGGACAGAGAGCCAGGGACTTCAGGGATCCTCTGAATAGTGGCCCAGAGATATTC 12152142 Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGATTAACCTGTCCCGCAG 160411 || |||||||| ||||| || | ||| ||||| |||| | |||| | || || Sbjct 12152143 ATCTGGGCTGTATGTGTCTTTTGCCCACTCCATAAACTTTTGGATTTTTTCATTCCCTAG 12152202 Query 160412 AACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGGTAT 160471 |||| || || ||| | || ||||| || || ||||| || || | || | Sbjct 12152203 CACGTACTCCACATACTTCCTGCTGACCACAAAATAGGCACTGCCTGAAAACAGAGGCGT 12152262 Query 160472 GGGTATAGGCGGC-GTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCAGCG 160530 | ||| || | || |||||| || || || | || | ||| || | | || Sbjct 12152263 TTCAAGAGGAGGTTGCGT-TTTGTCAGTCCCCGTATTTGTCAGCTTTCCATTAATGACCG 12152321 Query 160531 CGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGACTGT 160590 | |||| |||||||| | | || || | |||||| | || || ||||| ||| Sbjct 12152322 TATAATGCTTTTTCCACCTTTCTTTTTTATGGGATGGCATTCTCTCAGTTTCTAGGTTGT 12152381 Query 160591 TGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAAAGT 160650 | | || | ||| || || | | |||| || || ||||| || || | ||||||| Sbjct 12152382 TTTCTCCCATTAACGACTTGAGTTTCCTGACAATTTCCAGGTTGGTTTTAATAGGAAAGT 12152441 Query 160651 CGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCCTCA 160710 | ||||||| | || |||| ||| ||||| || |||| | | | ||||| || Sbjct 12152442 CCATACCGCAAAGATTGATCAGGTATTTCCAGGCTGCACTCATCTTGAGGAGGTCGTGCA 12152501 Query 160711 TGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTTTAC 160770 ||||||| | || ||||| || || ||||| ||||||||||| || |||| || | || Sbjct 12152502 TGCAATTGAGGTCGGCCTGAACCCGACTCCACGAAGCGTACACCACAGTCTCCAGCTGAC 12152561 Query 160771 TGGCCACAAAGACGTTATCGAAACACGACACGATTCC---CACCACCGCCAGAAAGAACA 160827 ||||||||||||| ||| |||||| || | || || ||| | ||||||||| | | Sbjct 12152562 TGGCCACAAAGACATTACTGAAACAGGAGGCAATGCCAGTCACTGCGGCCAGAAAGGA-A 12152620 Query 160828 TCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCC 160887 || || | ||| |||||| || | |||||| | ||||||||| |||||||||| Sbjct 12152621 TC--CTCTGATTTTTTGTCCACATGAATGCAATAGAAATTCTGAGGCATATAGATGGCCC 12152678 Query 160888 TGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAA 160947 | || | ||| || | ||| || || || ||||| | ||| || || || ||||| |||| Sbjct 12152679 TCAGGAGCCTGTCAAGCATTTCAATTTTGTGATGAACCACTATGGAATATGCTATGGGAA 12152738 Query 160948 ACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAAT 161007 |||| | ||| || ||| || | | | || || || ||||||| ||| || Sbjct 12152739 ACTCTGCCTCTTCTTTACTAAGAGGTTCTACAATATATTTGCGTCTCTTGATGAAAGAAG 12152798 Query 161008 CACAATCCCGCGTCATGTTGATATA 161032 |||||| | |||||||| ||||| Sbjct 12152799 TACAATCACTAGTCATGTTTATATA 12152823 >seq382 Length=20934477 Score = 147 bits (162), Expect = 3e-30 Identities = 209/294 (71%), Gaps = 0/294 (0%) Strand=Plus/Minus Query 168170 TCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCACATGAAGCAGCCTTCGTCCTC 168229 ||| |||||||| || || ||||| || |||||||||||| || | || || || || || Sbjct 1091591 TCCTGAAATCTTCCCAGAACCGAAGGTATTGAAGAGGCACGTGTAACAACCCTCATCGTC 1091532 Query 168230 CACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGGCCCAACTGCGTTATGTTCAC 168289 || ||||||||||| || || | |||| ||| || |||| || |||||||||| Sbjct 1091531 CAGAGTGGTATTCCAGAAGGTAATGGTTGTGTTCTTAAGTCCCAGCTCAGTTATGTTCAT 1091472 Query 168290 ACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTCTCGCTGAAGGTGGCCATGTT 168349 ||| ||||| | || || | ||||| || || | || |||||| ||| ||||||| Sbjct 1091471 CTTATCCTTATAGGCCGGCTGGAGCACAACCCCATGATCCTTGCTGAAAGTGACCATGTT 1091412 Query 168350 CTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATCAGAACCTCTTTATCGGTCTG 168409 || ||||| | ||||| || |||||||| || || ||||| || || | || | Sbjct 1091411 GTCTGGGCTTGAAGCCTTCATTTTCTGCCATGTCACAATCAGGACTTCCTCGGAAGTTTC 1091352 Query 168410 CAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTCTCGCTCATCTTGAGT 168463 ||| | |||| | ||| | || ||| |||| | |||| |||||||| || Sbjct 1091351 CAGAAAGCATCGTAAGGAAACAGGTTTGTGCAGCTGCTCTCTTTCATCTTGGGT 1091298 >seq893 Length=6136442 Score = 105 bits (116), Expect = 8e-18 Identities = 129/176 (73%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 176232 AGATATTTTACTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGT 176291 ||||| ||| |||| |||| ||| |||| |||||| | ||||| || |||| | || | Sbjct 614801 AGATACTTTGCTAGCTCACTTGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCT 614742 Query 176292 GGAATGTAGTTTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCT 176351 ||||| || |||||||| |||| || || || || | ||| | ||||| | | || Sbjct 614741 GGAATATAATTTTCATAGTTTTCCCTAGATGGCCCCAGAACAACAGGTACAGAGCCAGCC 614682 Query 176352 AATAATGAGCGGTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAA 176407 | || | ||||| |||||||| |||||| || |||| |||||||||||||| Sbjct 614681 AGAAAAGCATTGTAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCAAA 614626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 577210043860440