Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq469 96.9 3e-15 seq490 95.1 9e-15 seq394 84.2 2e-11 >seq469 Length=2019576 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| ||||| || ||||||||| | || | | | || || ||| Sbjct 1589200 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGCCAGACAAAGTACGTTCATC 1589259 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || |||| | ||||||| | |||| |||||||||||| || ||||| || || || || Sbjct 1589260 TTCTAGTTACTCGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 1589319 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| |||||| || | || |||| || |||||||| || || Sbjct 1589320 CTGGATCTTGGCCTTTACATTTTCTATTGTACCTGAGGGTTCAACCTCAAGAGTGATGGT 1589379 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | || | |||||| | || |||||||| || Sbjct 1589380 CTTCTCTGTAAGGGTTTTCATGAAAATCTGCATCTT 1589415 >seq490 Length=1953878 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||| || ||| ||||||| || || ||||| ||||| || || || || || | Sbjct 846137 CCACCCCGCAGACGAGGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCTGAG 846196 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | ||||| ||| || || |||||||||||| | |||| | ||||| || ||||| Sbjct 846197 AGAGTGCGGCCATCCTCCAGCTGTTTGCCAGCAAAAATCAGGCGCTGCTGGTCAGGCGGG 846256 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||| |||||| | || ||||||| | || ||||| | || || Sbjct 846257 ATGCCCTCCCGGTCTTGGATCTTAGCTTTGACACTCTCAGTGGTGTCGCTGGGCTCGACC 846316 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || | ||| || || || |||||||| Sbjct 846317 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 846363 >seq394 Length=10281828 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | |||||| ||||| || |||||||| |||| || | | | | || Sbjct 9695857 CAACACAAGATGAAGAGTGGACTCCTTTTGAATATTATGGTCAGACAAAGCACATCCTTC 9695916 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || ||||| ||||||||| | |||| |||||||||||| || |||| || || || || Sbjct 9695917 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAAGAATTCCTTCCTTATC 9695976 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || | || || ||| |||||| || || | |||| | |||||||| || || Sbjct 9695977 CTGGATCTTGGCCTTCACACTTTCTATTGTATCCAAGGGTTCACCCTCAAGAGTGATGGT 9696036 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || | | | |||||| || || | |||||| || Sbjct 9696037 CTTCCTTGCAAGGGTTTTCACGAAAACCTGCATCTT 9696072 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385213242223929