Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22]
1,269 sequences; 1,803,099,001 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq469 96.9 3e-15
seq490 95.1 9e-15
seq394 84.2 2e-11
>seq469
Length=2019576
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| ||||| || ||||||||| | || | | | || || |||
Sbjct 1589200 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGCTGTAGCCAGACAAAGTACGTTCATC 1589259
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| |||| | ||||||| | |||| |||||||||||| || ||||| || || || ||
Sbjct 1589260 TTCTAGTTACTCGCCAGCAAAAATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 1589319
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| | || || ||| |||||| || | || |||| || |||||||| || ||
Sbjct 1589320 CTGGATCTTGGCCTTTACATTTTCTATTGTACCTGAGGGTTCAACCTCAAGAGTGATGGT 1589379
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| | || | |||||| | || |||||||| ||
Sbjct 1589380 CTTCTCTGTAAGGGTTTTCATGAAAATCTGCATCTT 1589415
>seq490
Length=1953878
Score = 95.1 bits (104), Expect = 9e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||| || ||| ||||||| || || ||||| ||||| || || || || || |
Sbjct 846137 CCACCCCGCAGACGAGGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCTGAG 846196
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||| ||| || || |||||||||||| | |||| | ||||| || |||||
Sbjct 846197 AGAGTGCGGCCATCCTCCAGCTGTTTGCCAGCAAAAATCAGGCGCTGCTGGTCAGGCGGG 846256
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| ||||| |||||| | || ||||||| | || ||||| | || ||
Sbjct 846257 ATGCCCTCCCGGTCTTGGATCTTAGCTTTGACACTCTCAGTGGTGTCGCTGGGCTCGACC 846316
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || ||||| || | ||| || || || ||||||||
Sbjct 846317 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 846363
>seq394
Length=10281828
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633
|| ||| | |||||| ||||| || |||||||| |||| || | | | | ||
Sbjct 9695857 CAACACAAGATGAAGAGTGGACTCCTTTTGAATATTATGGTCAGACAAAGCACATCCTTC 9695916
Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693
|| ||||| ||||||||| | |||| |||||||||||| || |||| || || || ||
Sbjct 9695917 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAAGAATTCCTTCCTTATC 9695976
Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753
|| | || || ||| |||||| || || | |||| | |||||||| || ||
Sbjct 9695977 CTGGATCTTGGCCTTCACACTTTCTATTGTATCCAAGGGTTCACCCTCAAGAGTGATGGT 9696036
Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789
|| | | | |||||| || || | |||||| ||
Sbjct 9696037 CTTCCTTGCAAGGGTTTTCACGAAAACCTGCATCTT 9696072
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385213242223929
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |