Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq694 178 1e-38 seq893 143 2e-28 seq763 116 3e-20 seq411 104 2e-16 seq582 86.0 5e-11 >seq694 Length=962308 Score = 178 bits (196), Expect = 1e-38 Identities = 379/556 (68%), Gaps = 10/556 (2%) Strand=Plus/Minus Query 282275 ACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT-TCATT-TCTTTGTCTTGGT 282332 |||||| || || ||||||| |||||| || || |||| || | || || | || | Sbjct 653787 ACATCAAATGTGCCTCCACCCAGATCAAAGATCAGGACATGTCGCTCTCCCTGACCTGCT 653728 Query 282333 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 282392 || | | ||| ||||| |||| |||||||| ||||||||||| |||||||| | |||| Sbjct 653727 TTATCT-AAG-CCATAGGCAATGGCAGCAGCTGTTGGTTCATTGATAATTCTTAGTACAT 653670 Query 282393 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 282452 | ||||| ||||| |||||||| || || || || | ||| ||||| || ||||||| Sbjct 653669 TGAGACCTGCAATCACGCCTGCATCCTTGGTAGCCTGCCGTTGAGAATCATTGAAATATG 653610 Query 282453 CAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTT 282512 | || ||||| || || |||| || || | || | | |||| || || | | Sbjct 653609 CTGGCACAGTGATCACAGCATTGGTGACAGGGTGGCCCAAAAAAGCCTCAGCAGTCTCCT 653550 Query 282513 TCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGA-ATATTGCTTGGATTCATTT 282571 |||| ||| | | | ||| || || |||| |||||| | | | || | | | || Sbjct 653549 TCATCTTAGTCAGCACCATAGAGGAGATTTCCTCTGGATAGAAAGCTTTTTGCTCCCCTT 653490 Query 282572 TGATATGATACTTCAAAA--TATGGTTTATTACCAACATTAATAACTTTAAATGGCCAAT 282629 || || ||||| ||| | | || || || |||| | |||| ||| |||||| Sbjct 653489 TG-TAGGATAC--CAATACCTTGGGCTTGCCTCCTTCATTGGTTACTTGAAAAGGCCAAA 653433 Query 282630 ATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCAT 282689 ||||||||||||||| || | |||||||| | ||| ||||| | ||||| |||| Sbjct 653432 GTTTCATATCTGATTGCACTACAGGATCATTAAATTTTCTGCCAATCAGACGTTTGGCAT 653373 Query 282690 CAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 282749 |||| | ||| || ||||| | || | || | ||||||||||| ||||| || Sbjct 653372 CAAAGACAGTGTTCTGAGGATTCATGGCTACCTGGTTCTTGGCTGCATCCCCAATGAGCC 653313 Query 282750 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 282809 || || || || || | || || || || ||||| || || || || || |||| Sbjct 653312 TCTCAGTGTCGGTGAAAGCCACGTAGCTGGGGGTGGTGCGGTTGCCCTGGTCGTTGGCAA 653253 Query 282810 TAATTTCAACTTTACC 282825 | || || || || || Sbjct 653252 TGATCTCCACCTTGCC 653237 >seq893 Length=6136442 Score = 143 bits (158), Expect = 2e-28 Identities = 430/656 (66%), Gaps = 12/656 (2%) Strand=Plus/Minus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || ||||| ||||| || || || | || | || | |||| | | || | || | | Sbjct 1346618 TTGTCAAAGTCTTCTCCACCTAAGTGGGTGTCCCCAGCTGTAGATTTGACCTCAAAGATT 1346559 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGG---GTTCCACCACCCATATCAAAAATA 282307 |||||||||| | | || | ||| ||| | || ||||| |||| ||||| || Sbjct 1346558 CCATCTTCAATTGTGAG--GATTTACA-CATCGAAAGTGCCACCTCCCAAGTCAAAGATC 1346502 Query 282308 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 282367 || ||||| || | | ||||| || | || || |||| ||||| | |||| Sbjct 1346501 AGCACATTTCTTCCAGCTCCAACCTTTTTGTCTATGCCGTAAGCAATAGCAGTGGTAGTT 1346442 Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427 || ||||| || ||||| | ||||| ||||||||||| |||| |||||| || || Sbjct 1346441 GGCTCATTGATGATTCTAAGTACATTGAGACCAGCAATAGCACCTGTATCTTTGGTAGCC 1346382 Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTT 282487 || | || || || || || |||||||| || || | || |||| || || || Sbjct 1346381 TGACGCTGAGAGTCATTGAAGTATGCAGGTACTGTGACCACAGCATTGGTAACAGTCTTC 1346322 Query 282488 CCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCT 282547 |||| || || || ||| ||||| || | |||| | | ||||| | | |||| Sbjct 1346321 CCAAGGTAGGCTTCTGTGATTTCCTTCATCTTTGTCAAAACCGTAGATGACACCTCTTCT 1346262 Query 282548 GG--AGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAA 282605 || |||| || |||| || | ||| ||||| | | || | | || Sbjct 1346261 GGATAGAAACTT--TTGGTCTCTCCATTGTATTCTACTTGGACCTTGGGCCTGCCAGCAT 1346204 Query 282606 CATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAAT 282665 |||| | || | || ||||||| |||||||| ||| | | || | |||| Sbjct 1346203 CATTCACCACCATGAAGGGCCAATGCTTCATATCCAATTAGAGAGCAGCAGCA-TCAAAT 1346145 Query 282666 CTCT-ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGA 282724 || | ||||| || | || |||||||||| || ||||| ||||| | |||| | ||| Sbjct 1346144 CTATGTCCAATCAAGCACTTGGCATCAAAAACTGTGTTGGTAGGATTCATTGCAACCTGA 1346085 Query 282725 TATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTT 282784 | || || ||||| | ||||| |||| || || ||||| | |||||| ||| || Sbjct 1346084 TTCTTAGCAGCATCACTGATCAGTTGTTTGGTATCAGTAAAGGCAACATAACTTGGGGTG 1346025 Query 282785 GTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACC 282840 || || || || |||||| ||||| ||||| ||||| |||| || | ||||| Sbjct 1346024 GTTCGGTTTCCCTGATCACGGGCAATTATTTCCACTTTTCCATGCTGGAAGACACC 1345969 >seq763 Length=668163 Score = 116 bits (128), Expect = 3e-20 Identities = 111/142 (78%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | ||||| |||| ||||||||||||||| ||||| || ||||| | ||| Sbjct 116421 TTTTTGTCTAAGCCATAAGCAATAGCAGCAGCAGTTGGCTCATTGATGATTCTAAGTACA 116362 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 || ||||||||||| |||| |||||||| || || || | || || || || |||||| Sbjct 116361 TTGAGACCAGCAATAGTTCCAGCATCTTTGGTAGCCTGACGCTGAGAGTCATTGAAATAT 116302 Query 282452 GCAGGAACAGTAATAACGGCAT 282473 ||||| || || | ||| |||| Sbjct 116301 GCAGGTACTGTGACAACAGCAT 116280 >seq411 Length=2523640 Score = 104 bits (114), Expect = 2e-16 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 400297 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGCCTTAAT 400356 ||||| || ||| |||| || ||||| ||||||||||| || ||| | || |||||| | Sbjct 53350 TGTACACTTATTCTGACTGAAGGAGACTCAGCTAAAACCTTGGCTGTTTCAGGCCTTGGT 53409 Query 400357 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 400416 || |||| ||||| | || || |||||||| |||||||||||| | | |||||| || Sbjct 53410 GTGGTTGGGAGAGACAAGTACGGGGTTTTCCCTCTTAGAGGAAAAATACTCAATGTTCGG 53469 Query 400417 GATGCTAGTCCTAAA 400431 || ||| || |||| Sbjct 53470 GAAGCTTCTCATAAA 53484 >seq582 Length=7864270 Score = 86.0 bits (94), Expect = 5e-11 Identities = 201/295 (68%), Gaps = 24/295 (8%) Strand=Plus/Plus Query 281265 TTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTT--CTTGTTATCTGCTTCTTCAAA 281322 |||| ||||||||| | | ||||| || ||| ||| ||| || ||| | || |||| Sbjct 5037898 TTTCCAATTCATTTCTGGTATCAAT-GC-GCTCTTTGAGCTTTTTGTCTTCCTCAGCAAA 5037955 Query 281323 -TTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATT-- 281379 |||| | || || ||| ||| || ||||||| |||||| | | |||||| Sbjct 5037956 CTTCTCT-GCATCATTAACCATCCTTTCAATTT---CTTCAGG---TGTCAGGCGATTTT 5038008 Query 281380 ----ATTAGTAATAGTAATATTCTTGGATTTGTT---TGTTGATTTATCAGCGGCAGTCA 281432 ||| ||||| || || || || |||||| ||| ||| || | || |||| Sbjct 5038009 GGTCATTGGTAATTGTGATCTTATT---TTTGTTGCCTGTACCTTTGTCTTCAGCTGTCA 5038065 Query 281433 CATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCT 281492 | ||||| ||||| |||| | ||||| ||||||||||| || |||||||| | Sbjct 5038066 CTCGGAGAATGCCATTCACATCTATCTCAAAGGTGACTTCAATCTGTGGGACCCCACGGG 5038125 Query 281493 GAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGT 281547 ||||||| || || || || || ||| |||||||| || ||| ||||| || Sbjct 5038126 GAGCAGGAGGAATTCCAGTCAGATCAAAAGTTCCCAGGAGATGATTGTCTTTTGT 5038180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740568097462794