Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22]
1,269 sequences; 1,803,099,001 total letters
Query= NC_024382.1
Length=137090
Score E
Sequences producing significant alignments: (Bits) Value
seq828 98.7 9e-16
>seq828
Length=481723
Score = 98.7 bits (108), Expect = 9e-16
Identities = 92/114 (81%), Gaps = 6/114 (5%)
Strand=Plus/Plus
Query 167 CACACACAAGATACAAAACAGGTTATCAGAAAAATTCAGTATAATTTATTAAATAATTTT 226
|||||||||||| |||||||| |||| ||||||||||| |||||||||||||| | ||
Sbjct 176685 CACACACAAGATCCAAAACAGATTATGAGAAAAATTCAAAATAATTTATTAAAT-AGGTT 176743
Query 227 CAAGGGCTTCTTTAAGAAGCATTAACAA-TCTAACAACATTTTATAAATAACAA 279
| |||||| || ||| ||||||||||| ||| | ||| ||||||| |||
Sbjct 176744 CCAGGGCTCCTCCAAGGAGCATTAACAACTCTCAATACA----ATAAATATCAA 176793
Score = 87.8 bits (96), Expect = 2e-12
Identities = 199/291 (68%), Gaps = 25/291 (9%)
Strand=Plus/Plus
Query 1475 TCGATACCTGAGGGGGATACTATAGCAGGAGAGAGCGAGGCCGCCGCTTTGGCAACAGCT 1534
||| |||||| | |||| || || || | | |||| || || |||| || ||||||
Sbjct 178823 TCGGTACCTGGGCGGGAGACCATGGCGAGGGGGAGC-AGA--GCTGCTTCAGCGACAGCT 178879
Query 1535 GCTAGAGTGAGATGTGCTCGCTATACTTTTAGGGAACTG-TATATAAAGGGCTAGTTGTA 1593
|| ||| |||||||||||| || | ||| || |||||||||||| || ||
Sbjct 178880 CCTTGAGCCAGATGTGCTCGCCATGGCCTCCGGG---TGATATATAAAGGGCCCGTCGTG 178936
Query 1594 AGG-AGGAGCACTAAAAGTACCGCCCACGGTAAAGTCATTACTCAG-----------AAA 1641
||| |||| || | || || ||||||| || || | || ||||| |||
Sbjct 178937 AGGGAGGA-CAGTCAACGTTCCGCCCATGGCAAGATTATCGCTCAGCTTTTCTCCAGAAA 178995
Query 1642 ACA-TTTCAAAT-TTATGCCATCTGATCTTGGATAAAAGCAAGGCTCGAAGGAAATG--- 1696
||| ||||||| || |||| | || || | |||||| ||| ||||||| ||
Sbjct 178996 ACACTTTCAAAAATTCTGCCGCCCGAGGCTGAGTGAAAGCAGAGCTGGAAGGAAGTGCTG 179055
Query 1697 AAGTTACCCTTAAGATGGGCAGATGCTTGACGCACTGCATATACACACCGG 1747
| |||||||| ||| ||||||||||| |||| || ||| |||||| ||
Sbjct 179056 AGGTTACCCTCAAGGTGGGCAGATGCCTGACTCAGTGCGGGCACACACAGG 179106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 438553043342000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |