Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq1048 260 2e-64 seq893 161 1e-34 seq527 95.1 1e-14 seq382 87.8 2e-12 >seq1048 Length=13607314 Score = 260 bits (288), Expect = 2e-64 Identities = 627/942 (67%), Gaps = 15/942 (2%) Strand=Plus/Plus Query 162059 CCAGGGACTTATGTCGGAGATACTCGTCTAGACACTGGACCGCGAACACGTCTCGTTCCT 162118 |||||| |||| | |||||||| || |||||||||| || || | ||| ||| Sbjct 12151830 CCAGGGCTTTATTCCTCAGATACTCATCCAGACACTGGATGGCAAAGAGGTCAATGTCCA 12151889 Query 162119 CATCGAACTTGTTCGCGAACAGGTGATGCGAGTTCTTCAATATCCAATTAAGATCCCCCG 162178 | || |||||||| || |||| ||| ||| || || |||||| || | || || | Sbjct 12151890 CGTCAAACTTGTTGGCAAACAAGTGGTGC---TTGCGCAGTATCCAGTTCAAGTCACCTG 12151946 Query 162179 ATCCGAACACGCACACGGACCGCACGTGCACGCCGCTGCACGGCGGATACAGGGCCCCAT 162238 ||| || || |||||||| |||||||| || || |||| || ||||| | || || | Sbjct 12151947 CTCCAAAAACACACACGGAGCGCACGTGGACACCATTGCAGGGTGGATAGGGAGCACCCT 12152006 Query 162239 CGTCCACATCCCCCTCGTAGTATTGCCACTTAACGAACCTAGTGATAGCCTGCATGTCGG 162298 || | || || || |||| ||||| || || ||||||| || || |||||||||| Sbjct 12152007 TGTAAATGTCACCTTCAAAGTACTGCCATTTGACAAACCTAGCAATTGCATGCATGTCGG 12152066 Query 162299 AGGTGTCGTACTTGTACACTGACGGCACGGCTCCAGGAACACCCGGCAGTCTCTGTAGAG 162358 | |||||| ||| | | | | || | ||||| || | || | ||||| | || Sbjct 12152067 ACATGTCGTCCTTTTGGCTTAAGGACAGAGAGCCAGGGACTTCAGGGATCCTCTGAATAG 12152126 Query 162359 TAGCCCACAGGTGTTCGTCTGGACTATACGTCTCCTTCGACCACTCCATGAACTCCCTGA 162418 | ||||| || | ||| ||||| || || || || || | ||||||||| |||| || Sbjct 12152127 TGGCCCAGAGATATTCATCTGGGCTGTATGTGTCTTTTGCCCACTCCATAAACTTTTGGA 12152186 Query 162419 CCGTTTTATCGTATAGAATGTAAGAGACGTAGGACCTGGTCACAATAAAGTACGCGCTAC 162478 ||| || ||| | ||| || || |||| | || | ||| || || || | Sbjct 12152187 TTTTTTCATTCCCTAGCACGTACTCCACATACTTCCTGCTGACCACAAAATAGGCACTGC 12152246 Query 162479 CAGAAAACACGGGTATGCGTATAGGAGGGGGCTCTTTGTCTTGACCCGTGTTGACTACCA 162538 | ||||||| || | | |||||| || |||||| ||||| || | | Sbjct 12152247 CTGAAAACAGAGGCGTTTCAAGAGGAGGTTGCGTTTTGTCAGTCCCCGTATTTGTCAGCT 12152306 Query 162539 TTCCCTCTACGACCACGTGTCTCTTCCTCCACCTGGCCATCTTACTGGTAGACGGGTGT- 162597 |||| | | |||| | ||| ||||||| | | ||| ||| || || | Sbjct 12152307 TTCCATTAATGACCGTATAATGCTTTTTCCACCTTTCTTTTTTA-TGG--GATGGCATTC 12152363 Query 162598 --TCGGTCTCTAGACTGTTACGACCCCCCAAGGCCTTCAGCTGACGCACCATCTCTAGAT 162655 || || ||||| |||| ||| || | ||| || | | || || || || | Sbjct 12152364 TCTCAGTTTCTAGGTTGTTTTCTCCCATTAACGACTTGAGTTTCCTGACAATTTCCAGGT 12152423 Query 162656 TGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTCCACTTAACGCTGA 162715 |||| |||| |||||||| | ||||| ||||| || | |||||||| | || | Sbjct 12152424 TGGTTTTAATAGGAAAGTCCATACCGCAAAGATTGATCAGGTATTTCCAGGCTGCACTCA 12152483 Query 162716 GTCCGTACAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGACTCCACGACGCGTACA 162775 | || || || | || || || |||||||| || ||||||||||| ||||||| Sbjct 12152484 TCTTGAGGAGGTCGTGCATGCAATTGAGGTCGGCCTGAACCCGACTCCACGAAGCGTACA 12152543 Query 162776 CGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACGAAACTATCCCCATCA 162835 | || |||||| | | |||| ||||||||||| |||||| || | || || ||| Sbjct 12152544 CCACAGTCTCCAGCTGACTGGCCACAAAGACATTACTGAAACAGGAGGCAATGCCAGTCA 12152603 Query 162836 ---CGGCCAGTGAGAACATCGGGTCCGCTTTCCTATCTACGTGTACGCAGTATAGATTCT 162892 ||||||| || | ||| || | ||| | || || || | ||| || | ||||| Sbjct 12152604 CTGCGGCCAGAAAGGA-ATC--CTCTGATTTTTTGTCCACATGAATGCAATAGAAATTCT 12152660 Query 162893 GAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTTATGGTGTACCACGA 162952 |||| |||||||||||||| | || || | ||| || || || || || ||||| | Sbjct 12152661 GAGGCATATAGATGGCCCTCAGGAGCCTGTCAAGCATTTCAATTTTGTGATGAACCACTA 12152720 Query 162953 TAGAATACGCTATGGGGAACTCAGCCTCCTCGCGACTGAGAG 162994 | ||||| |||||||| ||||| ||||| || ||| |||| Sbjct 12152721 TGGAATATGCTATGGGAAACTCTGCCTCTTCTTTACTAAGAG 12152762 >seq893 Length=6136442 Score = 161 bits (178), Expect = 1e-34 Identities = 398/592 (67%), Gaps = 15/592 (3%) Strand=Plus/Minus Query 176887 TCCAGTTAAAGTATTGAAGATAAAGGGTGACGTTTTTATCGATGGCGTTGAGGTGCGAGG 176946 ||||||||||||| ||| || || | |||||| |||| | || || | | | Sbjct 614851 TCCAGTTAAAGTAACTAAGGTATAGCTTATTGTTTTTGTCGACTTCCTTCAGATACTTTG 614792 Query 176947 CCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAAT 177006 | || || | || || | || || | ||| |||||||| | ||| | || | |||| Sbjct 614791 CTAGCTCACTTGGAGAGTTATAATCTTCCACATGAATGAATGAATCTGCTGGAATATAAT 614732 Query 177007 TTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGATC 177066 |||| || || || || |||| || || || | ||||| | || |||| || || Sbjct 614731 TTTCATAGTTTTCCCTAGATGGCCCCAGAACAACAGGTACAGAGCCAGCCAGAAAAGCAT 614672 Query 177067 GGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAATT 177126 |||||| ||||| || || || || |||| | ||||| ||||| | || || |||| Sbjct 614671 TGTAGAGCTTTTCTGTGATGTAATCTTTGTGGATTGAGTTTTCAAAGGAAAGGTAAAATT 614612 Query 177127 TACAGGAAGATA--GTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTACGTT 177184 | || | ||||| ||| || || || | | ||| | ||| ||||| | | | | Sbjct 614611 TGCAAGTAGATATGGTA--GGAATCAAATTTTTATCATTCACATACTCTCCAAATGCTTG 614554 Query 177185 CCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGA-TCTCACGT 177243 ||| || ||| || || |||| ||| || ||||| ||| || || || || ||| Sbjct 614553 CCCATAGGTATGGATTTCAATGTTTTTGCTTAGCTCATTGTAATA-CTTGACCCTGGCGT 614495 Query 177244 GGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGC-GGGAACGGGA 177302 | || |||||| || || || |||||||| |||||||| |||||||| || || Sbjct 614494 GCTCAGGGTTCCAGTTACTTACAACCCAGCACACTAACTT-CTCTTTGCTTGGCAC---- 614440 Query 177303 TTC-GATACTAATGCAGTGTCT-CTGAGCGTTAGTGATCCATAGGGCACGTGAATATCCG 177360 ||| | || || | || | | || | ||| | | ||||| ||||| || ||||| | Sbjct 614439 TTCAAACACGAA-GGGGTTTGTGCTCACCGTCAAGAAGCCATAAGGCACTTGGATATCTG 614381 Query 177361 AGTCGCGTCTGTACGTTAACGTGAGATTGAAAAGGTTTTCTATACCTTGTTTGAAGGGGC 177420 ||||||| | ||| || | ||||||||||| |||| || || || || ||| Sbjct 614380 AGTCGCGGCGGTAAGTCAGAGTGAGATTGAATAGGTGCTCAATGCCACTCTTCTGGGGCG 614321 Query 177421 TGTTACTGGGCGATTCTAAGTTCATCCATATCCACTTTTGAAAGGTTGGTCT 177472 ||| | | || ||||| || |||||||| ||||| || || |||| ||| || Sbjct 614320 TGTGAGTTGGTGATTCCAAATTCATCCAAATCCATTTCTGGAAGGGTGGCCT 614269 >seq527 Length=8500414 Score = 95.1 bits (104), Expect = 1e-14 Identities = 226/336 (67%), Gaps = 8/336 (2%) Strand=Plus/Minus Query 162643 ACCATCTCTAGATTGGTCTTAAGGGGAAAGTCGGTGCCGCAGAGATTAATAACATATTTC 162702 |||||||| ||||||||||| |||||||| || || || ||| | | ||||||| Sbjct 2407048 ACCATCTCGGCATTGGTCTTAATAGGAAAGTCTGTTCCACATGTATTTAGGAGATATTTC 2406989 Query 162703 CACTTAACGCTGAG-TCCGTA-CAGATCCTGTAGACAGTTCAGATCGGCCTGGACGCGAC 162760 || | | ||||| || | | || || | | ||||||||| || ||||| || | Sbjct 2406988 CA--TGGCACTGAGCTCTGAAGCAAGTCTTCCATACAGTTCAGGTCAGCCTGCACCCTGG 2406931 Query 162761 TCCACGACGCGTACACGACGCTCTCCAACCTAGTGGCGACAAAGACATTGTCGAAACACG 162820 ||| || || || || || | ||||| || |||| | |||||||| ||| || | Sbjct 2406930 ACCAGGAGGCATAAACCACCCGAACCAACTTACTGGCCATGAAGACATTTGGGAAGCATG 2406871 Query 162821 AAACTATCCCCATCACGGCCAGTGAGAA--CATCGGGTCCGCTTTCCTATCTACGTGTAC 162878 ||| || || | || ||| | ||| | || | | ||| ||| || || || Sbjct 2406870 AAATAATTGCCTTGACTGCCTCTTTGAAAGCTTCTGAG--GACTTCTCATCCACATGAAC 2406813 Query 162879 GCAGTATAGATTCTGAGGGGCGTAGATGGCCCTCAGTAATCTCTCGAACATCTCTATCTT 162938 || |||| ||||||||||| || | || ||||| | || || || |||| ||||| Sbjct 2406812 ACAATATATGTTCTGAGGGGCATACACAGCTCTCAGCAGCCTTTCAAAGTTCTCAATCTT 2406753 Query 162939 ATGGTGTACCACGATAGAATACGCTATGGGGAACTC 162974 | || ||||| ||||| || || || ||||| || Sbjct 2406752 CTCATGGACCACCATAGAGTATGCAATAGGGAAGTC 2406717 >seq382 Length=20934477 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/226 (69%), Gaps = 9/226 (4%) Strand=Plus/Minus Query 171503 ACAGTTTGTCTGATGTCTGTTACAGTCCCCAAGTGTAAGACTTTGCATATCACCTCCTCG 171562 |||||||| | || ||| || ||||| |||| ||| | || | ||| |||||||||| Sbjct 1094167 ACAGTTTGCCCGAAGTCAGTCACAGTTCCCATGTGCAGCACCTGGCAGATCACCTCCT-- 1094110 Query 171563 TTTCCCACTTGACTTTTAGGATCTTTTACTTGAAGAATGCTAGTAACAGATGTAGTCCCG 171622 | |||| ||||| || |||||||| | || || |||| | |||| || ||||| Sbjct 1094109 -TCCCCATCTGACTCTTGGGATCTTTGATGTGGAGGCTGCTGATGACAGTCGTGGTCCCA 1094051 Query 171623 TTACGATGT---AGAACGGTTTTAGTACTATTTTCTATTCCGGATCCGGCAACTTTCCAA 171679 || | ||| | ||| | |||||| ||||| ||||| || | || ||||| Sbjct 1094050 TTGGGGTGTGTGATAACC---TCAGTACTGTTTTCCATTCCTGAGATAGAGACCTTCCAG 1093994 Query 171680 AATATAACAGGAGCTGGTCTAGCAGTAGCAGAGCAAGTTATGTTTA 171725 | || | ||| ||||| | ||| | ||||||||||| | |||| Sbjct 1093993 GAGATCATAGGGGCTGGGCGGGCATTGGCAGAGCAAGTGACATTTA 1093948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578422824622400