Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Miniopterus_20natalensis_20[refseq_20GCF_5F001595765.1_202016-03-22] 1,269 sequences; 1,803,099,001 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq633 102 5e-17 seq425 102 5e-17 seq490 89.7 3e-13 seq323 84.2 1e-11 >seq633 Length=1155427 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| | | | |||||| || || ||| |||||| || || ||||| || ||| Sbjct 85037 CCACCCCTCAGAGGAAGCACCAAGTGCAGGGTGGACTCTTTCTGAATATTGTAGTCTGAG 84978 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || || | ||||| || |||||||||| ||||||||| || | || Sbjct 84977 AGAGTGCGGCCATCCTCTAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 84918 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCAC 33701 || || ||||| ||||| || | |||| ||| ||||| || | || || Sbjct 84917 GTGCCCTCCTTGTCTTGGATTTT-TGCTCTGACATTCTCAATAGTGTCACTGGGCTCAAC 84859 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || | || || |||||||||||||| Sbjct 84858 CTCAAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 84811 >seq425 Length=2362534 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||| |||||||| || | |||| || |||||| ||| || || |||||||| |||| Sbjct 1424088 CACCTCCTCTCAAGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGG 1424029 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || ||||| |||| |||| || ||||| ||||| |||| | |||||| ||| | | Sbjct 1424028 ACAGGGTGCGCCCGTCTTCCAGCTGCTTTCCCGCAAAGATCAGCCTCTGCTGGTCTGGGG 1423969 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | || || ||||| || || || | ||| || | |||||| || | || Sbjct 1423968 GGATGCCCTCCTTGTCTTGGATCTTGGCCTTGA-CATTCTCGATGGTGTCACTGGGCTCG 1423910 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| || ||||| || | || || || ||||||||||| Sbjct 1423909 ACCTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 1423860 Score = 95.1 bits (104), Expect = 8e-15 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| | || | |||| || |||||| ||| || || |||||||| ||||| Sbjct 1423402 CCACCTCGGAGGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1423343 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || ||||| ||||| |||| | |||||| ||| | || Sbjct 1423342 AGGGTGCGCCCGTCTTCCAGCTGCTTTCCCGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 1423283 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | || || ||||| || || || | ||| ||| |||||| || | || || Sbjct 1423282 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGA-CATTCTCAATGGTGTCACTGGGCTCGAC 1423224 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATAGT 33752 || | ||||| || ||||| || || || || || ||||||||||| || Sbjct 1423223 CTCGAGGGTGATGGTCTTACCGGTCAAGGTCTTCACGAAGATCTGCATCGT 1423173 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| | || | |||| || |||||| ||| || || |||||||| ||||| Sbjct 1423630 CCACCTCGGAGGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1423571 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || ||||| ||||| |||| | |||||| ||| | || Sbjct 1423570 AGGGTGCGCCCGTCTTCCAGCTGCTTTCCCGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 1423511 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || || || | ||| || | |||||| || | || || Sbjct 1423510 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGA-CATTCTCGATGGTGTCACTGGGCTCGAC 1423452 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || ||||| || | || || || ||||||||||| Sbjct 1423451 CTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 1423404 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||||| | || | |||| || |||||| ||| || || |||||||| ||||| Sbjct 1423858 CCACCTCGGAGGCGCAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAC 1423799 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || ||||| ||||| |||| | |||||| ||| | || Sbjct 1423798 AGGGTGCGCCCGTCTTCCAGCTGCTTTCCCGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 1423739 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || || || | ||| || | |||||| || | || || Sbjct 1423738 ATGCCCTCCTTGTCTTGGATCTTGGCCTTGA-CATTCTCGATGGTGTCACTGGGCTCGAC 1423680 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || ||||| || | || || || ||||||||||| Sbjct 1423679 CTCGAGGGTGATGGTCTTACCGGTCAGGGTCTTCACGAAGATCTGCAT 1423632 >seq490 Length=1953878 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| |||||| || || ||| |||||| || || ||||| || ||| Sbjct 846137 CCACCCCGCAGACGAGGCACCAAGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCTGAG 846196 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| ||||| || |||||||||| |||||||| || |||| Sbjct 846197 AGAGTGCGGCCATCCTCCAGCTGTTTGCCAGCAAAAATCAGGCGCTGCTGGTCAGGCGGG 846256 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | || || ||| || || ||| | || ||| ||||||||| | || || Sbjct 846257 ATGCCCTCCCGGTCTTGGATCTTAGCTTTGA-CACTCTCAGTGGTGTCGCTGGGCTCGAC 846315 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || || ||||||||||| Sbjct 846316 CTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 846363 >seq323 Length=3567780 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| ||| | |||| || || ||| |||||| || |||||||| || || Sbjct 1425201 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAA 1425260 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| |||| |||| || || || ||||| || | | |||||| || | || Sbjct 1425261 AGAGTGCGGCCGTCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 1425320 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || || || |||| ||| || | |||||| || | ||||| Sbjct 1425321 ATGCCTTCCTTATCCTGGATCTTGGCCTTCA-CATTCTCGATGGTGTCACTGGGCTCCAC 1425379 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | || || || ||||||||||| Sbjct 1425380 CTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1425427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328698916284480